SecReT4
T4SS ID420
StrainAgrobacterium radiobacter K84
Repliconplasmid pAtK84c [Browse all T4SS(s) in this replicon]
AccessionNC_011987
Location43339..56123
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_011987
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Arad_1205339162..39602 [-], 441222102003hypothetical protein 
2Arad_1205439747..40214 [-], 468222102004nuclease 
3Arad_1205540220..40555 [-], 336222102005hypothetical protein 
4Arad_12056 (exoI)40613..41191 [-], 579222102006succinoglycan biosynthesis protein 
5Arad_1205741188..41856 [-], 669222102007acyltransferase protein 
6Arad_1205841853..42329 [-], 477222102008hypothetical protein 
7Arad_1205942348..42797 [-], 450222102009hypothetical protein 
8Arad_1206043339..44043 [+], 705222102010transglycosylase SLT domain protein  VirB1
9Arad_1206144061..44414 [+], 354222102011type IV secretion protein  VirB2
10Arad_1206344414..44710 [+], 297222102012type IV secretion protein  VirB3
11Arad_12064 (avhB4a)44736..47180 [+], 2445222102013type IV secretion protein  VirB4
12Arad_1206547312..47824 [+], 513222102014hypothetical protein 
13Arad_1206647838..48572 [+], 735222102015hypothetical protein  VirB5
14Arad_1206748569..48781 [+], 213222102016hypothetical protein 
15Arad_12068 (avhB6a)48858..49820 [+], 963222102017type IV secretion protein  VirB6
16Arad_12070 (avhB8a)49854..50600 [+], 747222102018type IV secretion protein  VirB8
17Arad_12071 (avhB9a)50642..51403 [+], 762222102019type IV secretion protein  VirB9
18Arad_12072 (avhB10a)51393..52676 [+], 1284222102020type IV secretion protein  VirB10
19Arad_12073 (avhB11a)52651..53763 [+], 1113222102021type IV secretion protein  VirB11
20Arad_1207453760..56123 [+], 2364222102022TRAG protein  VirD4
21Arad_1207656251..56943 [+], 693222102023hypothetical protein 
22Arad_12077 (repC)57333..58628 [+], 1296222102024replication protein C 
23Arad_1207958628..58804 [+], 177222102025hypothetical protein 
24Arad_1208059167..60762 [+], 1596222102026hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_011987