SecReT4
T4SS ID431
StrainPseudomonas syringae pv. maculicola plasmid pPMA4326A (NC_005918)
Repliconplasmid pPMA4326A [Browse all T4SS(s) in this replicon]
AccessionNC_005918
Location17976..33299
NameVirB
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111111
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_005918
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PMA4326A16 (yafA)13469..13807 [+], 33949188536stability/partitioning determinant 
2PMA4326A1714012..14989 [+], 97849188537IS1406 transposase 
3PMA4326A1815338..15724 [-], 38749188538hypothetical protein 
4PMA4326A19 (bip)15966..16436 [-], 47149188539bacteriocin immunity protein 
5PMA4326A2016524..16874 [-], 35149188540pbsX-like transcriptional regulator 
6PMA4326A2117139..17666 [+], 52849188541transcriptional regulator 
7PMA4326A2217732..17947 [+], 21649188542hypothetical protein 
8PMA4326A23 (virB1)17976..18674 [+], 69949188543VirB1  VirB1
9PMA4326A24 (virB2)18671..19009 [+], 33949188544VirB2  VirB2
10PMA4326A25 (virB3)19022..19498 [+], 47749188545VirB3  VirB3
11PMA4326A26 (virB4)19359..21911 [+], 255349188546VirB4  VirB4
12PMA4326A27 (virB5)21908..22594 [+], 68749188547VirB5  VirB5
13PMA4326A2822897..23130 [+], 23449188548hypothetical protein 
14PMA4326A29 (virB6)23141..24073 [+], 93349188549VirB6  VirB6
15PMA4326A30 (virB7)24141..24455 [+], 31549188550VirB7  VirB7
16PMA4326A31 (virB8)24492..25280 [+], 78949188551VirB8  VirB8
17PMA4326A32 (virB9)25270..26079 [+], 81049188552VirB9  VirB9
18PMA4326A33 (virB10)26204..27415 [+], 121249188553VirB10  VirB10
19PMA4326A34 (virB11)27425..28483 [+], 105949188554VirB11  VirB11
20PMA4326A3528493..28858 [+], 36649188555hypothetical protein 
21PMA4326A3629219..29485 [+], 26749188556hypothetical protein 
22PMA4326A3730074..31090 [+], 101749188557hypothetical protein 
23PMA4326A38 (virD4)31626..33299 [+], 167449188558VirD4  VirD4
24PMA4326A39 (kikA)33340..33702 [+], 36349188559killer protein 
25PMA4326A4033730..35895 [+], 216649188560topoisomerase 
26PMA4326A41 (PMA4326A41)35892..36446 [+], 55549188561hypothetical protein 
27PMA4326A4236474..37034 [+], 56149188562single-stranded binding protein 
28PMA4326A43 (stbB)37376..38095 [+], 72049188563stability/partitioning determinant 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Zhao Y; Ma Z; Sundin GW (2005). Comparative genomic analysis of the pPT23A plasmid family of Pseudomonas syringae. J Bacteriol. 187(6):2113-26. [PudMed:15743960] in_silico
(2) Stavrinides J; Guttman DS (2004). Nucleotide sequence and evolution of the five-plasmid complement of the phytopathogen Pseudomonas syringae pv. maculicola ES4326. J Bacteriol. 186(15):5101-15. [PudMed:15262947]
 
in_silico This literature contains bioinformatics investigation