SecReT4
T4SS ID432
StrainPseudomonas syringae pv. syringae plasmid pPSR1 (NC_005205)
Repliconplasmid pPSR1 [Browse all T4SS(s) in this replicon]
AccessionNC_005205
Location47681..60472
NameVirB
Functionconjugation
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number111111111
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_005205
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pPSR1_p35 (bip)45673..46143 [-], 47138257066Bip 
2pPSR1_p3646230..46577 [-], 34838257067Orf36 
3pPSR1_p3746844..47371 [+], 52838257068Orf37 
4pPSR1_p38 (virB1)47681..48388 [+], 70838257069VirB1  VirB1
5pPSR1_p39 (virB2)48385..48723 [+], 33938257070VirB2  VirB2
6pPSR1_p40 (virB3)48736..49224 [+], 48938257071VirB3  VirB3
7pPSR1_p41 (virB4)49073..51619 [+], 254738257072VirB4  VirB4
8pPSR1_p42 (virB5)51622..52308 [+], 68738257073VirB5  VirB5
9pPSR1_p43 (virB6)52706..53638 [+], 93338257074VirB6  VirB6
10pPSR1_p44 (virB7)53706..54008 [+], 30338257075VirB7  VirB7
11pPSR1_p45 (virB8)54046..54834 [+], 78938257076VirB8  VirB8
12pPSR1_p46 (virB9)54824..55633 [+], 81038257077VirB9  VirB9
13pPSR1_p47 (virB10)55620..56987 [+], 136838257078VirB10  VirB10
14pPSR1_p48 (virB11)56997..58028 [+], 103238257079hypothetical protein  VirB11
15pPSR1_p49 (virD4)58814..60472 [+], 165938257080hypothetical protein  VirD4
16pPSR1_p5060903..63068 [+], 216638257081Orf50 
17pPSR1_p51 (ssb)63927..64532 [+], 60638257082single-stranded DNA-binding protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Zhao Y; Ma Z; Sundin GW (2005). Comparative genomic analysis of the pPT23A plasmid family of Pseudomonas syringae. J Bacteriol. 187(6):2113-26. [PudMed:15743960] in_silico
(2) Sundin GW; Mayfield CT; Zhao Y; Gunasekera TS; Foster GL; Ullrich MS (2004). Complete nucleotide sequence and analysis of pPSR1 (72,601 bp), a pPT23A-family plasmid from Pseudomonas syringae pv. syringae A2. Mol Genet Genomics. 270(6):462-76. [PudMed:14634868]
 
in_silico This literature contains bioinformatics investigation