SecReT4
T4SS ID435
StrainXylella fastidiosa plasmid pXF-RIV16 (NC_014112)
Repliconplasmid pXF-RIV16 [Browse all T4SS(s) in this replicon]
AccessionNC_014112
Location4255..16432
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number011111011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_014112
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pXFRIV16_p01 (ORF1)130..1230 [+], 1101295788894P1 
2pXFRIV16_p02 (ORF2)1289..1552 [+], 264295788895P2 
3pXFRIV16_p03 (ORF3)1513..1875 [+], 363295788896P3 
4pXFRIV16_p04 (ORF4)1934..3070 [-], 1137295788897P4 
5pXFRIV16_p05 (ORF5)3136..4242 [-], 1107295788898P5 
6pXFRIV16_p06 (ORF6)4255..6531 [-], 2277295788899P6  VirD4
7pXFRIV16_p07 (ORF7)6528..7571 [-], 1044295788900P7  VirB11
8pXFRIV16_p08 (ORF8)7549..8847 [-], 1299295788901P8  VirB10
9pXFRIV16_p09 (ORF9)8850..9629 [-], 780295788902P9  VirB9
10pXFRIV16_p10 (ORF10)9626..10336 [-], 711295788903P10  VirB8
11pXFRIV16_p11 (ORF11)10340..11311 [-], 972295788904P11  VirB6
12pXFRIV16_p12 (ORF12)11511..11648 [+], 138295788905P12 
13pXFRIV16_p13 (ORF13)11859..12014 [+], 156295788906P13 
14pXFRIV16_p14 (ORF14)12243..12380 [+], 138295788907P14 
15pXFRIV16_p15 (ORF15)12408..12698 [+], 291295788908P15 
16pXFRIV16_p16 (ORF16)12679..13344 [-], 666295788909P16  VirB5
17pXFRIV16_p17 (ORF17)13347..15830 [-], 2484295788910P17  VirB4
18pXFRIV16_p18 (ORF18)15724..16107 [-], 384295788911P18  VirB3
19pXFRIV16_p19 (ORF19)16112..16432 [-], 321295788912P19  VirB2
20pXFRIV16_p20 (ORF20)16435..16908 [-], 474295788913P20 
21pXFRIV16_p21 (ORF21)17169..17291 [-], 123295788914P21 
22pXFRIV16_p22 (ORF22)18063..18281 [+], 219295788915P22 
23pXFRIV16_p23 (ORF23)18375..19046 [-], 672295788916P23 
24pXFRIV16_p24 (ORF24)19504..19818 [-], 315295788917P24 
25pXFRIV16_p25 (ORF25)19911..20513 [+], 603295788918P25 
26pXFRIV16_p26 (ORF26)20540..21376 [+], 837295788919P26 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
Identified as part of this study from NC_014112