SecReT4
T4SS ID438
StrainCandidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_012751
Location1238649..1250653
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number010011011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_012751
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1HDEF_13221234355..1235095 [+], 741238898432transposase 
2HDEF_1323 (mpg_2)1235099..1235611 [+], 5132388984333-methyladenine DNA glycosylase 
3HDEF_13251235999..1236136 [-], 138238898434hypothetical protein 
4HDEF_13241236107..1236727 [+], 621238898435transcriptional regulator 
5HDEF_13261237017..1237112 [+], 96238898436hypothetical protein 
6HDEF_13271237155..1237361 [-], 207238898437hypothetical protein 
7HDEF_13281237574..1237891 [+], 318238898438hypothetical protein 
8HDEF_13291237916..1238143 [+], 228238898439hypothetical protein 
9HDEF_1331 (triB)1238649..1238924 [+], 276238898440TriB conjugal transfer protein  VirB2
10HDEF_1333 (triD)1241699..1242445 [+], 747238898441TriD conjugal transfer protein  VirB5
11HDEF_13341242442..1242729 [+], 288238898442addiction module 
12HDEF_1335 (triE)1242803..1243777 [+], 975238898443TriE conjugal transfer protein  VirB6
13HDEF_13361243835..1244431 [-], 597238898444Tn5501-like resolvase 
14HDEF_13371244616..1244723 [-], 108238898445hypothetical protein 
15HDEF_1338 (triG)1244785..1245477 [+], 693238898446TriG conjugal transfer protein  VirB8
16HDEF_1339 (triH)1245480..1246409 [+], 930238898447TriH conjugal transfer protein  VirB9
17HDEF_1340 (triI)1246574..1247785 [+], 1212238898448TriI conjugal transfer protein  VirB10
18HDEF_1341 (triJ)1247782..1248813 [+], 1032238898449TriJ conjugal transfer protein  VirB11
19HDEF_1342 (taxB)1248800..1250653 [+], 1854238898450TaxB conjugal transfer protein  VirD4
20HDEF_13431250696..1251613 [+], 918238898451hypothetical protein 
21HDEF_13441251700..1252077 [+], 378238898452ISHde1, transposase 
22HDEF_13451252118..1252522 [+], 405238898453ISHde1, transposase 
23HDEF_1346 (pilM_2)1252547..1252963 [+], 417238898454PilM type IV pilus biogenesis protein 
24HDEF_1347 (pilN_3)1253062..1254702 [+], 1641238898455PilN type IV pilus biogenesis outer membrane protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_012751