SecReT4
T4SS ID454
StrainRuegeria sp. PR1b plasmid pSD25 (NC_004574)
Repliconplasmid pSD25 [Browse all T4SS(s) in this replicon]
AccessionNC_004574
Location66030..84508
NameVirB
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number200111011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_004574
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1rc15762711..63616 [+], 90628558884RC157 
2rc15863854..64645 [+], 79228558885RC158 
3rc15965115..66026 [-], 91228558886RC159 
4rc16066030..67037 [+], 100828558887RC160  VirB1
5rc16167573..69963 [+], 239128558888RC161  VirB4
6rc16270099..71271 [+], 117328558889RC162  VirB1
7rc16371271..72080 [+], 81028558890RC163  VirB5
8rc16472097..72750 [+], 65428558891RC164  VirB8
9rc16572909..73448 [+], 54028558892RC165  VirB9
10rc16673379..74824 [+], 144628558893RC166  VirB10
11rc16774766..75815 [+], 105028558894RC167  VirB11
12rc16876429..77505 [+], 107728558895RC168  VirB6
13rc16977677..78933 [+], 125728558896RC169 
14rc17078933..80651 [+], 171928558897RC170 
15rc17181395..82372 [+], 97828558898RC171 
16rc17282508..84508 [-], 200128558899RC172  VirD4
17rc17384517..86850 [-], 233428558900RC173 
18rc17487840..88970 [-], 113128558901RC174 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Zhong Z; Caspi R; Helinski D; Knauf V; Sykes S; O'Byrne C; Shea TP; Wilkinson JE; DeLoughery C; Toukdarian A (2003). Nucleotide sequence based characterizations of two cryptic plasmids from the marine bacterium Ruegeria isolate PR1b. Plasmid. 49(3):233-52. [PudMed:12749836]