SecReT4
T4SS ID460
StrainMethylovorus glucosetrophus SIP3-4
Repliconplasmid pMsip01 [Browse all T4SS(s) in this replicon]
AccessionNC_012970
Location28058..32882; 53214..62702
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01101

The information of T4SS components from NC_012970
Region 1: 28058..32882
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Msip34_287223376..23783 [-], 408254003157hypothetical protein 
2Msip34_287323843..24061 [-], 219254003158hypothetical protein 
3Msip34_287424273..24599 [-], 327254003159transcriptional modulator of MazE/toxin, MazF 
4Msip34_287524599..24832 [-], 234254003160transcriptional regulator/antitoxin, MazE 
5Msip34_287624917..26284 [-], 1368254003161diguanylate cyclase/phosphodiesterase 
6Msip34_287726286..28058 [-], 1773254003162DNA topoisomerase I 
7Msip34_287828058..28747 [-], 690254003163lytic transglycosylase  TrbN
8Msip34_287928758..30410 [-], 1653254003164C-5 cytosine-specific DNA methylase 
9Msip34_288030423..32882 [-], 2460254003165TRAG family protein  TraG
10Msip34_288133156..33899 [+], 744254003166hypothetical protein 
11Msip34_288234032..36092 [-], 2061254003167hypothetical protein 
12Msip34_288336082..36228 [-], 147254003168hypothetical protein 
 
Region 2: 53214..62702
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Msip34_289448662..48769 [-], 108254003179hypothetical protein 
2Msip34_289548787..50289 [-], 1503254003180AAA ATPase 
3Msip34_289650357..51472 [-], 1116254003181parB-like partition protein 
4Msip34_289751496..52236 [-], 741254003182Cobyrinic acid ac-diamide synthase 
5Msip34_289852229..52483 [-], 255254003183hypothetical protein 
6Msip34_289952674..53114 [-], 441254003184hypothetical protein 
7Msip34_290053214..54485 [-], 1272254003185conjugation TrbI family protein  TrbI
8Msip34_290154495..55406 [-], 912254003186Conjugal transfer protein TrbG/VirB9/CagX  TrbG
9Msip34_290255448..56158 [-], 711254003187Conjugal transfer protein  TrbF
10Msip34_290356169..57518 [-], 1350254003188P-type conjugative transfer protein TrbL  TrbL
11Msip34_290457712..58461 [-], 750254003189P-type conjugative transfer protein TrbJ  TrbJ
12Msip34_290558522..60996 [-], 2475254003190CagE TrbE VirB component of type IV transporter system  TrbE
13Msip34_290661024..61353 [-], 330254003191conjugal transfer protein  TrbD
14Msip34_290761346..61777 [-], 432254003192Conjugal transfer protein TrbC  TrbC
15Msip34_290861737..62702 [-], 966254003193P-type conjugative transfer ATPase TrbB  TrbB
16Msip34_290962712..62987 [-], 276254003194hypothetical protein 
17Msip34_291063149..64075 [+], 927254003195hypothetical protein 
18Msip34_291164078..64635 [+], 558254003196hypothetical protein 
19Msip34_291264635..66314 [+], 1680254003197type IVB pilus formation outer membrane protein, R64 PilN family 
20Msip34_291366317..67636 [+], 1320254003198hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_012970