SecReT4
T4SS ID47
StrainHaemophilus influenzae 86-028NP
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_007146
Location107635..133856
NameTfc
FunctionConjugation
ClassificationType IVC; Type G
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number111111011
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number111111111
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number111111

The information of T4SS components from NC_007146
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1NTHI0113104691..105119 [+], 42968248648hypothetical protein 
2NTHI0114105131..105223 [+], 9368248649hypothetical protein 
3NTHI0115105234..105875 [+], 64268248650hypothetical protein 
4NTHI0116105910..106317 [+], 40868248651hypothetical protein 
5NTHI0117 (radC2)106418..106888 [+], 47168248652DNA repair radC-like protein 
6NTHI0118106981..107577 [+], 59768248653hypothetical protein 
7NTHI0119107635..108399 [+], 76568248654hypothetical protein  Tfc1
8NTHI0120 (pilL)108498..109127 [+], 63068248655lipoprotein  Tfc2
9NTHI0121109131..109871 [+], 74168248656hypothetical protein  Tfc3
10NTHI0122109850..110608 [+], 75968248657hypothetical protein  Tfc4
11NTHI0123110624..111130 [+], 50768248658hypothetical protein  Tfc5
12NTHI0125111127..113376 [+], 225068248659hypothetical protein  Tfc6
13NTHI0126113695..114381 [+], 68768248660hypothetical protein  Tfc8
14NTHI0127114512..114862 [+], 35168248661hypothetical protein  Tfc9
15NTHI0128115131..115532 [+], 40268248662hypothetical protein  Tfc10
16NTHI0129115552..115923 [+], 37268248663hypothetical protein  Tfc11
17NTHI0130115935..116579 [+], 64568248664hypothetical protein  Tfc12
18NTHI0131116579..117448 [+], 87068248665hypothetical protein  Tfc13
19NTHI0132117459..118859 [+], 140168248666hypothetical protein  Tfc14
20NTHI0133118869..119276 [+], 40868248667lipoprotein  Tfc15
21NTHI0134119292..122162 [+], 287168248668hypothetical protein  Tfc16
22NTHI0135122170..122577 [+], 40868248669hypothetical protein  Tfc17
23NTHI0136122587..122910 [+], 32468248670hypothetical protein  Tfc18
24NTHI0137122919..124412 [+], 149468248671hypothetical protein  Tfc19
25NTHI0139124468..124797 [-], 33068248672hypothetical protein  Tfc20
26NTHI0141 (tnpA)124955..127960 [-], 300668248673transposon Tn3 transposase 
27NTHI0140126925..127041 [+], 11768248674hypothetical protein 
28NTHI0142 (tnpR)128088..128681 [+], 594162960936transposon Tn3 resolvase 
29NTHI2055128729..129589 [+], 861162960937beta-lactamase TEM 
30NTHI0143129813..129992 [+], 18068248676hypothetical protein 
31NTHI0144130037..130444 [-], 40868248677hypothetical protein  Tfc21
32NTHI0145130460..132460 [-], 200168248678hypothetical protein  Tfc22
33NTHI0146132475..133416 [-], 94268248679hypothetical protein  Tfc23
34NTHI0147133413..133856 [-], 44468248680hypothetical protein  Tfc24
35NTHI0148134168..134587 [+], 42068248681hypothetical protein 
36NTHI0149134672..134905 [+], 23468248682hypothetical protein 
37NTHI0150134908..135156 [+], 24968248683hypothetical protein 
38NTHI0151135160..135318 [+], 15968248684hypothetical protein 
39NTHI0152 (traC)135449..136402 [+], 95468248685antirestriction protein 
40NTHI0153136506..137267 [+], 76268248686type I restriction enzyme M subunit 
41NTHI0154137493..138059 [+], 56768248687hypothetical protein 
42NTHI0155138099..138473 [+], 37568248688hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICEHin86-28NP and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
(2) Juhas M; Power PM; Harding RM; Ferguson DJ; Dimopoulou ID; Elamin AR; Mohd-Zain Z; Hood DW; Adegbola R; Erwin A; Smith A; Munson RS; Harrison A; Mansfield L; Bentley S; Crook DW (2007). Sequence and functional analyses of Haemophilus spp. genomic islands. Genome Biol. 8(11):R237. [PudMed:17996041] in_silico
 
in_silico This literature contains bioinformatics investigation