SecReT4
T4SS ID479
StrainBurkholderia pseudomallei MSHR346
Repliconchromosome I [Browse all T4SS(s) in this replicon]
AccessionNC_012695
Location920942..945330
NameTrb
Functionconjugation
ClassificationType IVA; Type P
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_012695
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1GBP346_A0950916051..916344 [-], 294237811223helix-turn-helix domain protein 
2GBP346_A0951916567..916914 [+], 348237811224hypothetical protein 
3GBP346_A0952916983..917126 [-], 144237811225hypothetical protein 
4GBP346_A0953917256..918005 [+], 750237811226hypothetical protein 
5GBP346_A0954918089..918379 [+], 291237811227hypothetical protein 
6GBP346_A0955918406..919263 [+], 858237811228replication protein A 
7GBP346_A0956919517..920155 [+], 639237811229cobyrinic acid ac-diamide synthase 
8GBP346_A0957920143..920415 [+], 273237811230hypothetical protein 
9GBP346_A0958920412..920945 [+], 534237811231hypothetical protein 
10GBP346_A0959920942..921529 [+], 588237811232traf peptidase, serine peptidase, merops family s26c  TraF
11GBP346_A0960921965..923926 [+], 1962237811233hypothetical protein 
12GBP346_A0961925072..926466 [+], 1395237811234Rieske (2Fe-2S) domain protein 
13GBP346_A0962926463..926939 [+], 477237811235anthranilate dioxygenase small subunit 
14GBP346_A0963928663..929502 [+], 840237811236hydroxyquinol 1,2-dioxygenase (1,2-HQD) 
15GBP346_A0964929707..930783 [+], 1077237811237maleylacetate reductase 
16GBP346_A0965931006..931860 [+], 8552378112384-hydroxybenzoate transporter 
17GBP346_A0966932160..932309 [+], 150237811239hypothetical protein 
18GBP346_A0967932425..933393 [+], 969237811240LysR family transcriptional regulator 
19GBP346_A0968933772..935775 [+], 2004237811241conjugal transfer coupling protein TraG  TraG
20GBP346_A0969935772..936236 [+], 465237811242CopG domain protein DNA-binding domain protein 
21GBP346_A0970 (trbB)936233..937261 [+], 1029237811243P-type conjugative transfer ATPase TrbB  TrbB
22GBP346_A0971937258..937632 [+], 375237811244conjugal transfer protein TrbC  TrbC
23GBP346_A0972937629..937898 [+], 270237811245conjugal transfer protein  TrbD
24GBP346_A0973937909..940371 [+], 2463237811246conjugal transfer ATPase TrbE  TrbE
25GBP346_A0974 (trbJ)940368..941132 [+], 765237811247conjugal transfer protein TrbJ  TrbJ
26GBP346_A0975 (trbL)941181..942329 [+], 1149237811248P-type conjugative transfer protein TrbL  TrbL
27GBP346_A0976942342..943046 [+], 705237811249conjugal transfer protein TrbF  TrbF
28GBP346_A0977 (trbG)943043..944047 [+], 1005237811250P-type conjugative transfer protein TrbG  TrbG
29GBP346_A0978944050..945330 [+], 1281237811251conjugation TrbI family protein  TrbI
30GBP346_A0979945327..945569 [+], 243237811252hypothetical protein 
31GBP346_A0980946517..946909 [-], 393237811253ISPsy5, transposase 
32GBP346_A0981947965..948105 [+], 141237811254hypothetical protein 
33GBP346_A0982948470..949219 [+], 7502378112553-oxoadipate CoA-transferase, A subunit 
34GBP346_A0983949216..949884 [+], 6692378112563-oxoadipate CoA-transferase subunit B (Beta-ketoadipate:succinyl-CoA transferase subunit B) 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICE(Tn4371)6064 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 0.543055556. [PudMed:19941653] in_silico
 
in_silico This literature contains bioinformatics investigation