SecReT4
T4SS ID482
StrainAcidithiobacillus ferrooxidans ATCC 53993
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_011206
Location231853..262371
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_011206
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Lferr_0240226995..228848 [+], 1854198282384hypothetical protein 
2Lferr_0241228913..229755 [+], 843198282385hypothetical protein 
3Lferr_0242229752..231332 [+], 1581198282386Type IV secretory pathway VirD2 pilin (relaxase)-like protein 
4Lferr_0243231404..231856 [+], 453198282387hypothetical protein 
5Lferr_0244231853..232821 [+], 969198282388P-type conjugative transfer ATPase TrbB  TrbB
6Lferr_0245232898..233284 [+], 387198282389conjugal transfer protein TrbC  TrbC
7Lferr_0246233288..233665 [+], 378198282390hypothetical protein  TrbD
8Lferr_0247233665..236187 [+], 2523198282391CagE TrbE VirB component of type IV transporter system  TrbE
9Lferr_0248236184..237347 [+], 1164198282392hypothetical protein 
10Lferr_0249237429..238169 [+], 741198282393P-type conjugative transfer protein TrbJ  TrbJ
11Lferr_0250238181..238435 [+], 255198282394hypothetical protein 
12Lferr_0251238449..240140 [+], 1692198282395P-type conjugative transfer protein TrbL  TrbL
13Lferr_0252240217..240615 [+], 399198282396hypothetical protein 
14Lferr_0253240612..240953 [+], 342198282397hypothetical protein 
15Lferr_0254241275..242114 [+], 840198282398TIR (Toll-Interleukin 1-resistance) domain-containing protein-like protein 
16Lferr_0255242238..243125 [-], 888198282399hypothetical protein 
17Lferr_0256243472..244140 [+], 669198282400conjugal transfer protein  TrbF
18Lferr_0257244153..245253 [+], 1101198282401conjugal transfer protein TrbG/VirB9/CagX  TrbG
19Lferr_0258245255..246265 [+], 1011198282402hypothetical protein 
20Lferr_0259246268..247677 [+], 1410198282403conjugation TrbI family protein  TrbI
21Lferr_0260247688..247990 [+], 303198282404hypothetical protein 
22Lferr_0261247987..248664 [+], 678198282405Lytic transglycosylase  TrbN
23Lferr_0262248675..251104 [+], 2430198282406TRAG family protein  TraG
24Lferr_0263251433..251621 [+], 189198282407hypothetical protein 
25Lferr_0264251621..251917 [+], 297198282408plasmid stabilization system 
26Lferr_0266253330..254967 [-], 1638198282409transposase IS66 
27Lferr_0267255017..255364 [-], 348198282410IS66 Orf2 family protein 
28Lferr_0268255355..255687 [-], 333198282411hypothetical protein 
29Lferr_0270257291..258190 [-], 900198282412phospholipase D 
30Lferr_0271258518..258775 [-], 258198282413hypothetical protein 
31Lferr_0272258859..260097 [-], 1239198282414parB-like partition protein 
32Lferr_0273260099..260869 [-], 771198282415cobyrinic acid ac-diamide synthase 
33Lferr_0274260872..261267 [-], 396198282416hypothetical protein 
34Lferr_0275261316..261627 [-], 312198282417hypothetical protein 
35Lferr_0276261781..262371 [-], 591198282418Type IV secretory pathway protease TraF-like protein  TraF
36Lferr_0277262343..262555 [-], 213198282419hypothetical protein 
37Lferr_0279262844..264202 [-], 1359198282420conjugal transfer protein TraB 
38Lferr_0280264199..264792 [-], 594198282421hypothetical protein 
39Lferr_0282265276..265572 [+], 297198282422putative transcriptional regulator 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_011206