SecReT4
T4SS ID483
StrainAcidithiobacillus ferrooxidans ATCC 53993
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_011206
Location1288233..1297008; 1348580..1356320
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01101

The information of T4SS components from NC_011206
Region 1: 1288233..1297008
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Lferr_13251283489..1283683 [-], 195198283445hypothetical protein 
2Lferr_13261283728..1285365 [-], 1638198283446transposase IS66 
3Lferr_13271285415..1285762 [-], 348198283447IS66 Orf2 family protein 
4Lferr_13281285753..1286085 [-], 333198283448putative transposase 
5Lferr_13291286193..1286336 [+], 144198283449hypothetical protein 
6Lferr_13301286353..1286460 [+], 108198283450hypothetical protein 
7Lferr_13311286768..1286914 [+], 147198283451addiction module killer protein 
8Lferr_13321286918..1287217 [+], 300198283452putative transcriptional regulator 
9Lferr_13331287784..1288236 [+], 453198283453hypothetical protein 
10Lferr_13341288233..1289201 [+], 969198283454P-type conjugative transfer ATPase TrbB  TrbB
11Lferr_13351289250..1289630 [+], 381198283455hypothetical protein 
12Lferr_13361289598..1290389 [-], 792198283456hypothetical protein 
13Lferr_13371290594..1290980 [+], 387198283457conjugal transfer protein TrbC  TrbC
14Lferr_13381290984..1291361 [+], 378198283458hypothetical protein  TrbD
15Lferr_13391291361..1293883 [+], 2523198283459CagE TrbE VirB component of type IV transporter system  TrbE
16Lferr_13401293880..1294134 [+], 255198283460hypothetical protein 
17Lferr_13411294217..1294957 [+], 741198283461P-type conjugative transfer protein TrbJ  TrbJ
18Lferr_13421294969..1295223 [+], 255198283462hypothetical protein 
19Lferr_13431295239..1297008 [+], 1770198283463P-type conjugative transfer protein TrbL  TrbL
20Lferr_13441297094..1297474 [+], 381198283464hypothetical protein 
21Lferr_13451297648..1298115 [-], 468198283465hypothetical protein 
22Lferr_13461298504..1299988 [-], 1485198283466protease Do 
23Lferr_13471300488..1300934 [-], 447198283467heat shock protein Hsp20 
 
Region 2: 1348580..1356320
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Lferr_13881344053..1344385 [-], 333198283507ribulose-bisphosphate carboxylase 
2Lferr_1389 (rbcL)1344477..1345898 [-], 1422198283508ribulose bisophosphate carboxylase 
3Lferr_13901346043..1346969 [+], 927198283509LysR family transcriptional regulator 
4Lferr_13911347413..1348270 [+], 858198283510hypothetical protein 
5Lferr_13921348580..1349248 [+], 669198283511conjugal transfer protein  TrbF
6Lferr_13931349261..1350376 [+], 1116198283512conjugal transfer protein TrbG/VirB9/CagX  TrbG
7Lferr_13941350378..1351394 [+], 1017198283513hypothetical protein 
8Lferr_13951351397..1352857 [+], 1461198283514conjugation TrbI family protein  TrbI
9Lferr_13961352868..1353170 [+], 303198283515hypothetical protein 
10Lferr_13971353167..1353823 [+], 657198283516Lytic transglycosylase  TrbN
11Lferr_13981353834..1356320 [+], 2487198283517TRAG family protein  TraG
12Lferr_13991356430..1356624 [+], 195198283518hypothetical protein 
13Lferr_14001356626..1356832 [+], 207198283519hypothetical protein 
14Lferr_14011357765..1358259 [+], 495198283520hypothetical protein 
15Lferr_14021358260..1358418 [+], 159198283521hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_011206