SecReT4
T4SS ID504
StrainNeorickettsia sennetsu str. Miyayama
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_007798
Location178418..179218; 658571..664294; 758873..773636
NameVirB
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number001104012
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_007798
Region 1: 178418..179218
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1NSE_0206 (priA)174366..176495 [+], 213088608231primosomal protein N' 
2NSE_0207176511..176684 [+], 17488608562hypothetical protein 
3NSE_0208176762..177796 [+], 103588608465hypothetical protein 
4NSE_0209177802..178398 [-], 59788608821exopolysaccharide synthesis protein 
5NSE_0210 (virB9-1)178418..179218 [-], 80188608055type IV secretion system protein VirB9  VirB9
6NSE_0211 (virB8-1)179202..179849 [-], 64888607971type IV secretion system protein VirB8 
7NSE_0212 (grpE)179931..180494 [+], 56488608234co-chaperone GrpE 
8NSE_0213 (trpS)180524..181516 [+], 99388608758tryptophanyl-tRNA synthetase 
9NSE_0214181579..181785 [+], 2078860887750S ribosomal protein L35 
10NSE_0215 (rplT)181799..182152 [+], 3548860858350S ribosomal protein L20 
11NSE_0216 (pheS)182149..183126 [+], 97888608710phenylalanyl-tRNA synthetase subunit alpha 
12NSE_0217 (rpiB)183158..183616 [+], 45988608285ribose 5-phosphate isomerase B 
 
Region 2: 658571..664294
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1NSE_0734 (ppa)654760..655278 [+], 51988608039inorganic pyrophosphatase 
2NSE_0735655545..656363 [-], 81988608691hypothetical protein 
3NSE_0736656369..656461 [-], 9388608886hypothetical protein 
4NSE_0737 (gltX-2)656477..657706 [-], 123088608680glutamyl-tRNA synthetase 
5NSE_0738657802..658377 [-], 57688608162hypothetical protein 
6NSE_0739 (virD4)658571..660496 [-], 192688608007type IV secretion system component VirD4  VirD4
7NSE_0740 (virB11)660527..661522 [-], 99688608308type IV secretion system ATPase VirB11  VirB11
8NSE_0741 (virB10)661528..662901 [-], 137488608478type IV secretion system protein VirB10  VirB10
9NSE_0742 (virB9-2)662908..663630 [-], 72388608571type IV secretion system protein VirB9  VirB9
10NSE_0743 (virB8-2)663617..664294 [-], 67888608885type IV secretion system protein VirB8  VirB8
11NSE_0744664338..664511 [-], 17488608672hypothetical protein 
12NSE_0745 (ribA)664568..665629 [-], 106288608776GTP cyclohydrolase II 
13NSE_0746665846..666844 [+], 99988608183pyruvate dehydrogenase subunit beta 
14NSE_0747667003..667134 [-], 13288608003hypothetical protein 
15NSE_0748667199..667462 [+], 26488608602hypothetical protein 
16NSE_0749667645..667968 [+], 32488608397hypothetical protein 
 
Region 3: 758873..773636
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1NSE_0852 (purC)754295..755017 [-], 72388608255phosphoribosylaminoimidazole-succinocarboxamide synthase 
2NSE_0853 (ribE-2)755331..755933 [+], 60388608601riboflavin synthase subunit alpha 
3NSE_0854 (lgt)756036..756836 [+], 80188608475prolipoprotein diacylglyceryl transferase 
4NSE_0855756879..757856 [-], 97888607965putative cytochrome oxidase assembly protein 
5NSE_0856 (rpmH)758080..758214 [+], 1358860840150S ribosomal protein L34 
6NSE_0857 (rnpA)758205..758546 [+], 34288608075ribonuclease P protein component 
7NSE_0858758552..758860 [+], 30988608620hypothetical protein 
8NSE_0859758873..762322 [-], 345088608766VirB6 family type IV secretion system protein  VirB6
9NSE_0860762252..765761 [-], 351088608816VirB6 family type IV secretion system protein  VirB6
10NSE_0861765772..768291 [-], 252088607975VirB6 family type IV secretion system protein  VirB6
11NSE_0862 (virB6)768308..770929 [-], 262288607976type IV secretion system protein VirB6  VirB6
12NSE_0863 (virB4-2)770926..773337 [-], 241288608419type IV secretion system ATPase VirB4  VirB4
13NSE_0864 (virB3)773340..773636 [-], 29788608247type IV secretion system protein VirB3  VirB3
14NSE_0865773969..775732 [-], 176488608377putative ABC transporter ATP-binding protein/permease 
15NSE_0866775861..776952 [-], 109288608035patatin-like phospholipase family protein 
16NSE_0867776970..777077 [-], 10888608848hypothetical protein 
17NSE_0868777087..777188 [-], 10288608499hypothetical protein 
18NSE_0869777334..778200 [+], 86788608171hypothetical protein 
19NSE_0870778226..778372 [+], 14788608402hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Dunning Hotopp JC; Lin M; Madupu R; Crabtree J; Angiuoli SV; Eisen JA; Seshadri R; Ren Q; Wu M; Utterback TR; Smith S; Lewis M; Khouri H; Zhang C; Niu H; Lin Q; Ohashi N; Zhi N; Nelson W; Brinkac LM; Dodson RJ; Rosovitz MJ; Sundaram J; Daugherty SC; Davidsen T; Durkin AS; Gwinn M; Haft DH; Selengut JD; Sullivan SA; Zafar N; Zhou L; Benahmed F; Forberger H; Halpin R; Mulligan S; Robinson J; White O; Rikihisa Y; Tettelin H (2006). Comparative genomics of emerging human ehrlichiosis agents. PLoS Genet. 2(2):e21. [PudMed:16482227]