SecReT4
T4SS ID505
StrainEhrlichia ruminantium str. Gardel
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_006831
Location12170..18481; 856552..876198; 1254693..1255469; 1343161..1351345; 1343161..1351345
NameVirB
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number041204012
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_006831
Region 1: 12170..18481
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ERGA_CDS_000907804..8553 [+], 75058616736hypothetical protein 
2ERGA_CDS_00100 (nadA)8568..9515 [+], 94858616737quinolinate synthetase 
3ERGA_CDS_00110 (fdxA)9675..10052 [-], 37858616738ferredoxin 
4ERGA_CDS_0012010263..11528 [+], 126658616739hypothetical protein 
5ERGA_CDS_00130 (virD4)12170..14572 [-], 240358616740type IV secretion system component VirD4  VirD4
6ERGA_CDS_00140 (virB11)14613..15611 [-], 99958616741type IV secretion system ATPase VirB11  VirB11
7ERGA_CDS_00150 (virB10)15635..16975 [-], 134158616742VirB10 protein  VirB10
8ERGA_CDS_00160 (trbG)16996..17799 [-], 80458616743conjugal transfer protein trbG precursor  VirB9
9ERGA_CDS_0017017783..18481 [-], 69958616744hypothetical protein  VirB8
10ERGA_CDS_00180 (ribA)18637..19752 [-], 111658616745GTP cyclohydrolase II 
11ERGA_CDS_0019021573..22637 [-], 106558616746hypothetical protein 
12ERGA_CDS_0020022713..23192 [-], 48058616747hypothetical protein 
 
Region 2: 856552..876198
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ERGA_CDS_05330 (ispH)851584..852582 [+], 999586172604-hydroxy-3-methylbut-2-enyl diphosphate reductase 
2ERGA_CDS_05340 (dut)853598..853972 [+], 37558617261deoxyuridine 5-triphosphate nucleotidohydrolase 
3ERGA_CDS_05350854936..855535 [+], 60058617262hypothetical protein 
4ERGA_CDS_05360856552..863454 [-], 690358617263hypothetical protein  VirB6
5ERGA_CDS_05370863472..868247 [-], 477658617264hypothetical protein  VirB6
6ERGA_CDS_05380868129..870861 [-], 273358617265hypothetical protein  VirB6
7ERGA_CDS_05390870999..873464 [-], 246658617266hypothetical protein  VirB6
8ERGA_CDS_05400 (virB4)873497..875902 [-], 240658617267type IV secretion system ATPase VirB4  VirB4
9ERGA_CDS_05410875899..876198 [-], 30058617268type IV secretion system protein VirB3  VirB3
10ERGA_CDS_05420 (sodB)876584..877216 [-], 63358617269superoxide dismutase 
11ERGA_CDS_05430 (pstA)877482..878744 [+], 126358617270phosphate ABC transporter permease 
 
Region 3: 1254693..1255469
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ERGA_CDS_078201252488..1253333 [+], 84658617509hypothetical protein 
2ERGA_CDS_07830 (pdhA)1253556..1254545 [+], 99058617510pyruvate dehydrogenase E1 component, alpha subunit 
3ERGA_CDS_07840 (trbG)1254693..1255469 [+], 77758617511conjugal transfer protein TRBG precursor  VirB9
4ERGA_CDS_07850 (trx)1255560..1255883 [+], 32458617512thioredoxin 
5ERGA_CDS_078601257808..1259025 [-], 121858617513hypothetical protein 
6ERGA_CDS_07870 (xseB)1260059..1260247 [-], 18958617514exodeoxyribonuclease VII small subunit 
 
Region 4: 1343161..1351345
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ERGA_CDS_08350 (virB4)1343161..1345533 [-], 237358617562VirB4 protein  VirB4
2ERGA_CDS_083601347206..1347622 [-], 41758617563hypothetical protein  VirB2
3ERGA_CDS_083701347876..1348241 [-], 36658617564hypothetical protein  VirB2
4ERGA_CDS_083801349154..1349495 [-], 34258617565hypothetical protein  VirB2
5ERGA_CDS_083901350971..1351345 [-], 37558617566hypothetical protein  VirB2
6ERGA_CDS_084001351895..1352095 [+], 20158617567hypothetical protein 
7ERGA_CDS_08410 (hflK)1352150..1353220 [+], 107158617568protease activity modulator hflk 
8ERGA_CDS_08420 (hflC)1353232..1354104 [+], 87358617569Hflc protein 
9ERGA_CDS_08430 (degP)1354104..1355534 [+], 143158617570serine protease do-like precursor 
10ERGA_CDS_084401355542..1356156 [+], 61558617571hypothetical protein 
 
Region 5: 1343161..1351345
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ERGA_CDS_08350 (virB4)1343161..1345533 [-], 237358617562VirB4 protein  VirB4
2ERGA_CDS_083601347206..1347622 [-], 41758617563hypothetical protein  VirB2
3ERGA_CDS_083701347876..1348241 [-], 36658617564hypothetical protein  VirB2
4ERGA_CDS_083801349154..1349495 [-], 34258617565hypothetical protein  VirB2
5ERGA_CDS_083901350971..1351345 [-], 37558617566hypothetical protein  VirB2
6ERGA_CDS_084001351895..1352095 [+], 20158617567hypothetical protein 
7ERGA_CDS_08410 (hflK)1352150..1353220 [+], 107158617568protease activity modulator hflk 
8ERGA_CDS_08420 (hflC)1353232..1354104 [+], 87358617569Hflc protein 
9ERGA_CDS_08430 (degP)1354104..1355534 [+], 143158617570serine protease do-like precursor 
10ERGA_CDS_084401355542..1356156 [+], 61558617571hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Frutos R; Viari A; Ferraz C; Morgat A; Eychenie S; Kandassamy Y; Chantal I; Bensaid A; Coissac E; Vachiery N; Demaille J; Martinez D (2006). Comparative genomic analysis of three strains of Ehrlichia ruminantium reveals an active process of genome size plasticity. J Bacteriol. 188(7):2533-42. [PudMed:16547041]