SecReT4
T4SS ID508
StrainRickettsia heilongjiangensis 054
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_015866
Location136896..154306; 256959..257318; 390919..398814; 1131660..1134092
NameVirB
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number011205022
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_015866
Region 1: 136896..154306
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Rh054_00775132209..132493 [-], 285341583359hypothetical protein 
2Rh054_00780132699..132998 [-], 300341583360hypothetical protein 
3Rh054_00785133180..133557 [-], 378341583361hypothetical protein 
4Rh054_00805 (rpmB)134469..134762 [+], 29434158336250S ribosomal protein L28 
5Rh054_00810134759..134995 [+], 23734158336350S ribosomal protein L31 
6Rh054_00815 (engB)135374..136012 [+], 639341583364GTP-binding protein YsxC 
7Rh054_00820135960..136883 [+], 924341583365acetylglutamate kinase 
8Rh054_00825136896..137183 [+], 288341583366type IV secretion system protein VirB3  VirB3
9Rh054_00830137399..139816 [+], 2418341583367type IV secretion system ATPase VirB4  VirB4
10Rh054_00835139934..142936 [+], 3003341583368hypothetical protein  VirB6
11Rh054_00840142923..144938 [+], 2016341583369hypothetical protein  VirB6
12Rh054_00845144945..147845 [+], 2901341583370hypothetical protein  VirB6
13Rh054_00850148017..150692 [+], 2676341583371channel protein  VirB6
14Rh054_00855150845..154306 [+], 3462341583372hypothetical protein  VirB6
15Rh054_00860154370..154558 [+], 189341583373hypothetical protein 
16Rh054_00890157104..157214 [+], 111341583374hypothetical protein 
17Rh054_00895157214..157366 [+], 153341583375hypothetical protein 
18Rh054_00900157410..157508 [+], 99341583376hypothetical protein 
19Rh054_00905 (trmD)157560..158264 [+], 705341583377tRNA (guanine-N(1)-)-methyltransferase 
20Rh054_00910 (rplS)158282..158698 [+], 41734158337850S ribosomal protein L19 
21Rh054_00915158868..159104 [-], 237341583379hypothetical protein 
 
Region 2: 256959..257318
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Rh054_01380252551..252691 [+], 141341583464hypothetical protein 
2Rh054_01385252829..253122 [-], 294341583465hypothetical protein 
3Rh054_01390253275..253748 [+], 474341583466hypothetical protein 
4Rh054_01395 (holA)253756..254730 [+], 975341583467DNA polymerase III subunit delta 
5Rh054_01400254875..255414 [+], 540341583468ubiquinone biosynthesis protein coq7 
6Rh054_01405255957..256088 [-], 132341583469hypothetical protein 
7Rh054_01410256087..256803 [+], 717341583470cytochrome c oxidase subunit III 
8Rh054_01415256959..257318 [+], 360341583471virB2 protein  VirB2
9Rh054_01420257753..258385 [-], 633341583472hypothetical protein 
10Rh054_01425 (dapD)258461..259285 [+], 8253415834732,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 
11Rh054_01430259546..259713 [-], 168341583474hypothetical protein 
 
Region 3: 390919..398814
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Rh054_02190386726..387130 [-], 405341583611Toxin of toxin-antitoxin system VapC 
2Rh054_02195387121..387408 [-], 288341583612Antitoxin of toxin-antitoxin (TA) system VapB 
3Rh054_02200387599..389062 [-], 1464341583613putative monovalent cation/H+ antiporter subunit D 
4Rh054_02205389207..390322 [-], 1116341583614putative monovalent cation/H+ antiporter subunit D 
5Rh054_02210390505..390840 [-], 336341583615putative monovalent cation/H+ antiporter subunit C 
6Rh054_02215390919..391671 [-], 753341583616VirB9  VirB9
7Rh054_02220391673..392371 [-], 699341583617virB8 protein  VirB8
8Rh054_02225392835..393014 [+], 180341583618hypothetical protein 
9Rh054_02230393064..393795 [+], 732341583619hypothetical protein  VirB8
10Rh054_02235393782..394255 [+], 474341583620virB9b protein  VirB9
11Rh054_02240394437..395885 [+], 1449341583621virB10 protein  VirB10
12Rh054_02245395882..396886 [+], 1005341583622type IV secretion system ATPase VirB11  VirB11
13Rh054_02250397039..398814 [+], 1776341583623type IV secretion system component VirD4  VirD4
14Rh054_02255398816..400228 [+], 1413341583624exopolyphosphatase 
15Rh054_02260400310..400942 [-], 633341583625hypothetical protein 
16Rh054_02265400935..401042 [-], 108341583626hypothetical protein 
17Rh054_02270401498..401599 [-], 102341583627hypothetical protein 
18Rh054_02275402110..402559 [+], 450341583628phage portal protein 
19Rh054_02280402501..402788 [-], 288341583629phage host specificity protein 
 
Region 4: 1131660..1134092
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Rh054_066201127692..1129233 [+], 1542341584367AmpG 
2Rh054_066251129300..1130055 [+], 756341584368Sec-independent protein translocase protein TatC 
3Rh054_066301130033..1131310 [+], 1278341584369seryl-tRNA synthetase 
4Rh054_066351131660..1134092 [+], 2433341584370virB4 protein  VirB4
5Rh054_066401134227..1137715 [+], 3489341584371hypothetical protein 
6Rh054_066451137720..1138625 [+], 906341584372tellurium resistance protein TerC 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Duan C; Tong Y; Huang Y; Wang X; Xiong X; Wen B (2011). Complete genome sequence of Rickettsia heilongjiangensis, an emerging tick-transmitted human pathogen. J Bacteriol. 193(19):5564-5. [PudMed:21914880]