SecReT4
T4SS ID509
StrainCandidatus Midichloria mitochondrii IricVA
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_015722
Location268366..270612; 413626..419348; 663237..665336; 680352..680642; 751689..754247; 842292..843785
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number010102022
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_015722
Region 1: 268366..270612
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1midi_00293265035..265292 [+], 258339319596hypothetical protein 
2midi_00294265754..268366 [-], 2613339319597hypothetical protein 
3midi_00295 (virB4)268366..270612 [-], 2247339319598type IV secretion system protein VirB4  VirB4
4midi_00296271043..271312 [+], 270339319599hypothetical protein 
5midi_00297 (dapD)271784..272515 [-], 7323393196002,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 
6midi_00300 (dapA)272505..273389 [-], 885339319601dihydrodipicolinate synthase 
7midi_00301 (dapB)273379..274143 [-], 765339319602dihydrodipicolinate reductase 
8midi_00302274472..275203 [-], 732339319603hypothetical protein 
 
Region 2: 413626..419348
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1midi_00439410896..411222 [+], 327339319737hypothetical protein 
2midi_00440411522..411761 [+], 240339319738hypothetical protein 
3midi_00441 (fliP)412519..412959 [-], 441339319739flagellar biosynthesis protein FliP 
4midi_00442413252..413404 [-], 153339319740hypothetical protein 
5midi_00443 (virD4)413626..415011 [-], 1386339319741type IV secretion system protein VirD4  VirD4
6midi_00444 (virB11)415440..416423 [-], 984339319742type IV secretion system protein VirB11  VirB11
7midi_00445 (virB10)416420..417898 [-], 1479339319743type IV secretion system protein VirB10  VirB10
8midi_00446 (virB9)417944..418657 [-], 714339319744type IV secretion system protein VirB9  VirB9
9midi_00447 (virB8)418641..419348 [-], 708339319745type IV secretion system protein VirB8  VirB8
10midi_00448 (sodA)419392..420015 [-], 624339319746superoxide dismutase 
11midi_00449420169..421086 [+], 918339319747NADH dehydrogenase subunit I 
12midi_00450421090..421446 [+], 357339319748NADH dehydrogenase subunit II 
13midi_00451421685..421999 [+], 315339319749hypothetical protein 
14midi_00452422003..422512 [+], 510339319750hypothetical protein 
15midi_00453 (truB)422545..423426 [+], 882339319751tRNA pseudouridine synthase B 
16midi_00454 (rpsO)423436..423705 [+], 27033931975230S ribosomal protein S15 
 
Region 3: 663237..665336
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1midi_00697660660..661250 [+], 591339319984putative yrdC domain-containing protein 
2midi_00698661430..661609 [+], 180339319985hypothetical protein 
3midi_00699661760..661969 [+], 210339319986glycosyl transferase, group 1 
4midi_00700663237..665336 [-], 2100339319987putative type IV secretion system protein  VirB6
5midi_00701665354..666763 [-], 1410339319988type IV secretion system protein 
6midi_00702666827..668293 [-], 1467339319989hypothetical protein 
 
Region 4: 680352..680642
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1midi_00707676033..676215 [-], 183339319992hypothetical protein 
2midi_00708 (pyrG)677764..679413 [-], 1650339319993CTP synthase 
3midi_00709 (secG)679419..679721 [-], 303339319994preprotein translocase subunit SecG 
4midi_00710679834..680130 [+], 297339319995hypothetical protein 
5midi_00711 (virB2)680352..680642 [+], 291339319996type IV secretion system protein VirB2  VirB2
6midi_00712680856..681824 [+], 969339319997octaprenyl-diphosphate synthase 
7midi_00713682242..682406 [+], 165339319998hypothetical protein 
8midi_00714682453..682605 [+], 153339319999hypothetical protein 
9midi_00715683276..683461 [+], 186339320000putative transposase 
10midi_00716683475..683606 [+], 132339320001putative transposase 
11midi_00717683625..683858 [+], 234339320002putative transposase 
12midi_00718 (gltX)683983..685338 [-], 1356339320003glutamyl-tRNA synthetase 
 
Region 5: 751689..754247
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1midi_00785 (lepA)747894..749567 [+], 1674339320066GTP-binding protein LepA 
2midi_00786749774..750430 [-], 657339320067hypothetical protein 
3midi_00787750882..751070 [+], 189339320068putative transposase 
4midi_00788751689..754247 [-], 2559339320069putative type IV secretion system protein  VirB6
5midi_00789754252..754782 [-], 531339320070hypothetical protein 
6midi_00790755632..755886 [+], 255339320071hypothetical protein 
7midi_00791756260..756385 [+], 126339320072hypothetical protein 
8midi_00792756455..756568 [+], 114339320073hypothetical protein 
9midi_00793757233..757364 [+], 132339320074putative transposase 
10midi_00794757558..757671 [+], 114339320075hypothetical protein 
11midi_00795 (plsC)757743..758444 [-], 7023393200761-acyl-sn-glycerol-3-phosphate acyltransferase 
 
Region 6: 842292..843785
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1midi_00891 (cYT1)837614..838378 [+], 765339320166cytochrome c1 heme protein 
2midi_00892838383..839684 [+], 1302339320167ubiquinone biosynthesis protein 
3midi_00893 (gltA)839914..841230 [+], 1317339320168citrate synthase I 
4midi_00894841709..841822 [-], 114339320169putative transposase 
5midi_00895842292..843071 [-], 780339320170putative type IV secretion system protein  VirB9
6midi_00896843075..843785 [-], 711339320171putative type IV secretion system protein  VirB8
7midi_00897843894..844958 [-], 1065339320172hypothetical protein 
8midi_00898844951..845613 [-], 663339320173chromosomal replication initiator proteinDnaA like protein 
9midi_00899845718..846560 [-], 843339320174putative permease 
10midi_00900846575..846973 [-], 399339320175hypothetical protein 
11midi_00901 (pcnB)847021..848223 [-], 1203339320176polyApolymerase family protein 
12midi_00902848484..848762 [+], 279339320177membrane protein implicated in regulation of membrane protease activity 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_015722