SecReT4
T4SS ID512
StrainShewanella baltica OS185
Repliconplasmid pS18501 [Browse all T4SS(s) in this replicon]
AccessionNC_009661
Location41601..68320
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number010

The information of T4SS components from NC_009661
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Shew185_442236848..37249 [+], 402152998519hypothetical protein 
2Shew185_442337619..37912 [+], 294152998520hypothetical protein 
3Shew185_442437893..38402 [+], 510152998521hypothetical protein 
4Shew185_442538515..38742 [+], 228152998522HicB-related protein 
5Shew185_442639317..40315 [+], 999152998523hypothetical protein 
6Shew185_442740364..40663 [+], 300152998524hypothetical protein 
7Shew185_442841221..41580 [+], 360152998525hypothetical protein 
8Shew185_442941601..47561 [-], 5961152998526conjugative transfer relaxase protein TraI  TraI_F
9Shew185_443047813..49939 [-], 2127152998527Type IV conjugative transfer system coupling protein TraD  TraD_F
10Shew185_443149942..50475 [-], 534152998528hypothetical protein 
11Shew185_443250513..53323 [-], 2811152998529TraG domain-containing protein  TraG_F
12Shew185_443353326..54714 [-], 1389152998530TraH family protein  TraH_F
13Shew185_443454897..55340 [-], 444152998531Type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 
14Shew185_443555337..56074 [-], 738152998532hypothetical protein 
15Shew185_443656110..56985 [-], 876152998533Type-F conjugative transfer system pilin assembly protein TraF  TraF_F
16Shew185_443756982..58796 [-], 1815152998534conjugal transfer mating pair stabilization protein TraN  TraN_F
17Shew185_443858793..59530 [-], 738152998535Type-F conjugative transfer system pilin assembly protein TrbC  TrbC_F
18Shew185_443959553..60566 [-], 1014152998536TraU family protein  TraU_F
19Shew185_444060553..61257 [-], 705152998537Type-F conjugative transfer system protein TraW  TraW_F
20Shew185_444161254..61625 [-], 372152998538pilus assembly protein 
21Shew185_444261627..64215 [-], 2589152998539Type-IV secretion system protein TraC  TraC_F
22Shew185_444364219..64662 [-], 444152998540Type IV conjugative transfer system protein TraV  TraV_F
23Shew185_444464695..66221 [-], 1527152998541TraB pilus assembly family protein  TraB_F
24Shew185_444566218..67036 [-], 819152998542Type-F conjugative transfer system secretin TraK  TraK_F
25Shew185_444667036..67602 [-], 567152998543TraE family protein  TraE_F
26Shew185_444767643..67945 [-], 303152998544Type IV conjugative transfer system protein TraL  TraL_F
27Shew185_444867949..68320 [-], 372152998545hypothetical protein  TraA_F
28Shew185_444969924..70655 [+], 732152998546hypothetical protein 
29Shew185_445071317..71547 [-], 231152998547hypothetical protein 
30Shew185_445171713..72912 [+], 1200152998548cobyrinic acid ac-diamide synthase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_009661