SecReT4
T4SS ID514
StrainAsticcacaulis excentricus CB 48 plasmid pASTEX02 (NC_014819)
Repliconplasmid pASTEX02 [Browse all T4SS(s) in this replicon]
AccessionNC_014819
Location43117..53707; 77866..98235
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number011

The information of T4SS components from NC_014819
Region 1: 43117..53707
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Astex_374038602..39075 [-], 474315500704YD repeat-containing protein 
2Astex_374440837..42057 [+], 1221315500705transposase mutator type 
3Astex_374542258..42542 [-], 285315500706transposase IS3/IS911 family protein 
4Astex_374642922..43017 [+], 96315500707hypothetical protein 
5Astex_374743117..46260 [-], 3144315500708conjugative relaxase domain protein  TraI_F
6Astex_374846260..48875 [-], 2616315500709hypothetical protein  TraD_F
7Astex_374948895..49296 [-], 402315500710hypothetical protein 
8Astex_375050004..50387 [+], 384315500711hypothetical protein 
9Astex_375150731..50868 [-], 138315500712hypothetical protein 
10Astex_375250930..51217 [+], 288315500713hypothetical protein 
11Astex_375351888..52070 [-], 183315500714hypothetical protein 
12Astex_375452124..52531 [-], 408315500715single-strand binding protein 
13Astex_375552764..53294 [-], 531315500716hypothetical protein 
14Astex_375653447..53707 [+], 261315500717hypothetical protein  TraA_F
15Astex_375754148..54573 [+], 426315500718hypothetical protein 
16Astex_375854788..55267 [-], 480315500719hypothetical protein 
17Astex_375955560..56039 [+], 480315500720GreA/GreB family elongation factor 
18Astex_376056118..56489 [-], 372315500721hypothetical protein 
19Astex_376156502..56924 [-], 423315500722Antirestriction protein 
20Astex_376257183..57428 [-], 246315500723hypothetical protein 
21Astex_376357443..58033 [-], 591315500724hypothetical protein 
22Astex_376458168..58551 [-], 384315500725transcriptional modulator of MazE/toxin, MazF 
 
Region 2: 77866..98235
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Astex_377572990..73676 [+], 687315500735partition protein ParA 
2Astex_377673687..73998 [+], 312315500736hypothetical protein 
3Astex_377774792..75997 [+], 1206315500737Replication initiator protein A 
4Astex_377876229..77497 [-], 1269315500738replication protein C 
5Astex_377977866..78678 [-], 813315500739hypothetical protein  Orf169_F
6Astex_378078719..79084 [-], 366315500740hypothetical protein 
7Astex_378179232..79762 [-], 531315500741hypothetical protein 
8Astex_378280149..80454 [+], 306315500742hypothetical protein 
9Astex_378380610..80891 [+], 282315500743type IV conjugative transfer system protein TraL  TraL_F
10Astex_378480892..81491 [+], 600315500744hypothetical protein  TraE_F
11Astex_378581497..82207 [+], 711315500745TraK family protein  TraK_F
12Astex_378682207..83535 [+], 1329315500746conjugation TrbI family protein  TraB_F
13Astex_378783544..84350 [+], 807315500747disulfide bond isomerase, DsbC/G-like protein 
14Astex_378884343..84789 [+], 447315500748Type IV conjugative transfer system protein TraV  TraV_F
15Astex_378984786..87533 [+], 2748315500749type-IV secretion system protein TraC  TraC_F
16Astex_379087514..87831 [+], 318315500750purine-cytosine permease-like transporter 
17Astex_379187815..88288 [+], 474315500751hypothetical protein 
18Astex_379288272..88778 [+], 507315500752Peptidase S26, conserved region 
19Astex_379388778..89410 [+], 633315500753type-F conjugative transfer system protein TraW  TraW_F
20Astex_379489407..90417 [+], 1011315500754TraU family protein  TraU_F
21Astex_379590407..91138 [+], 732315500755type-F conjugative transfer system pilin assembly protein TrbC  TrbC_F
22Astex_379691135..92958 [+], 1824315500756hypothetical protein  TraN_F
23Astex_379792963..93886 [+], 924315500757TraF-like protein  TraF_F
24Astex_379893898..95283 [+], 1386315500758TraH family protein  TraH_F
25Astex_379995293..98235 [+], 2943315500759hypothetical protein  TraG_F
26Astex_380098239..98592 [-], 354315500760hypothetical protein 
27Astex_380198728..99141 [+], 414315500761hypothetical protein 
28Astex_380299270..99677 [+], 408315500762hypothetical protein 
29Astex_380399692..99898 [-], 207315500763helix-turn-helix domain protein 
30Astex_3804100071..100373 [-], 303315500764hypothetical protein 
31Astex_3805100498..100938 [+], 441315500765transcriptional regulator, MucR family 
32Astex_3806101123..102097 [+], 975315500766Exonuclease RNase T and DNA polymerase III 
33Astex_3807102142..102414 [-], 273315500767histone family protein DNA-binding protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_014819