SecReT4
T4SS ID515
StrainVibrio vulnificus plasmid pC4602-1 (NC_009702)
Repliconplasmid pC4602-1 [Browse all T4SS(s) in this replicon]
AccessionNC_009702
Location20379..49553
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
experimental Experimental investigation has been performed on this T4SS.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101010
ComponentTraY_FTrbC_FOrf169_F
Number011

The information of T4SS components from NC_009702
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pC46021_44 (vpa30)16052..16897 [+], 846153971611putative transposase 
2pC46021_45 (vpa31)17691..18521 [-], 831153971612hypothetical protein 
3pC46021_46 (vpa32)19214..19402 [+], 189153971613hypothetical protein 
4pC46021_47 (vpa33)19257..19526 [-], 270153971614hypothetical protein 
5pC46021_48 (vpa34)19723..20031 [-], 309153971615hypothetical protein 
6pC46021_05 (traA)20379..20666 [+], 288153971616putative conjugative transfer protein TraA  TraA_F
7pC46021_14 (traL)20676..20978 [+], 303153971617putative conjugative transfer protein TraL  TraL_F
8pC46021_08 (traE)20993..21568 [+], 576153971618putative conjugative transfer protein TraE  TraE_F
9pC46021_13 (traK)21555..22340 [+], 786153971619putative conjugative transfer protein TraK  TraK_F
10pC46021_06 (traB)22330..23862 [+], 1533153971620putative conjugative transfer protein TraB  TraB_F
11pC46021_49 (vpa40)23868..24260 [+], 393153971621hypothetical protein 
12pC46021_50 (vpa41)24273..26822 [+], 2550153971622putative conjugative transfer protein TraC  TraC_F
13pC46021_17 (traW)26785..27504 [+], 720153971623putative conjugative transfer protein TraW  TraW_F
14pC46021_16 (traU)27501..28511 [+], 1011153971624putative conjugative transfer protein TraU  TraU_F
15pC46021_51 (vpa44)28521..28754 [+], 234153971625hypothetical protein 
16pC46021_52 (vpa45)28768..29481 [+], 714153971626putative conjugative transfer protein TrbC  TrbC_F
17pC46021_15 (traN)29518..31242 [+], 1725153971627putative conjugative transfer protein TraN  TraN_F
18pC46021_09 (traF)31290..32069 [+], 780153971628putative conjugative transfer protein TraF  TraF_F
19pC46021_53 (vpa48)32087..32500 [+], 414153971629putative conjugative transfer protein TrbB 
20pC46021_11 (traH)32497..33903 [+], 1407153971630putative conjugative transfer protein TraH  TraH_F
21pC46021_10 (traG)33907..36720 [+], 2814153971631putative conjugative transfer protein TraG  TraG_F
22pC46021_54 (vpa51)36803..37339 [+], 537153971632hypothetical protein 
23pC46021_55 (vpa52)37471..38499 [-], 1029153971633transposase and inactivated derivatives 
24pC46021_56 (vpa53)38582..39139 [+], 558153971634hypothetical protein 
25pC46021_57 (vpa54)39154..39399 [+], 246153971635hypothetical protein 
26pC46021_07 (traD)40171..42270 [+], 2100153971636putative conjugative transfer protein TraD  TraD_F
27pC46021_12 (traI)42389..48163 [+], 5775153971637putative conjugative transfer protein TraI  TraI_F
28pC46021_58 (vpa57)48182..48541 [-], 360153971638cysteinyl-tRNA synthetase 
29pC46021_04 (pilT)49107..49553 [-], 447153971639putative PilT protein  Orf169_F
30pC46021_59 (vpa59)49636..51018 [-], 1383153971640LtrC-like protein 
31pC46021_60 (vpa60)51216..51482 [+], 267153971641hypothetical protein 
32pC46021_61 (vpa61)51587..51883 [-], 297153971642transcriptional regulator, Cro/CI family 
33pC46021_62 (vpa62)51959..52258 [-], 300153971643hypothetical protein 
34pC46021_63 (vpa63)52296..52514 [-], 219153971644hypothetical protein 
35pC46021_64 (vpa64)52559..52717 [-], 159153971645hypothetical protein 
36pC46021_65 (vpa65)52749..53072 [-], 324153971646type I restriction-modification system 
37pC46021_66 (vpa66)53139..53447 [-], 309153971647hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Lee CT; Amaro C; Wu KM; Valiente E; Chang YF; Tsai SF; Chang CH; Hor LI (2008). A common virulence plasmid in biotype 2 Vibrio vulnificus and its dissemination aided by a conjugal plasmid. J Bacteriol. 190(5):1638-48. [PudMed:18156267] experimental
 
experimental This literature contains experimental investigation