SecReT4
T4SS ID516
StrainBurkholderia cenocepacia HI2424
Repliconplasmid 1 [Browse all T4SS(s) in this replicon]
AccessionNC_008545
Location1389..27585; 157460..162469
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number100101110
ComponentTraY_FTrbC_FOrf169_F
Number011

The information of T4SS components from NC_008545
Region 1: 1389..27585
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Bcen2424_67891389..1886 [+], 498116687165lytic transglycosylase, catalytic  Orf169_F
2Bcen2424_67901883..2272 [+], 390116687166hypothetical protein 
3Bcen2424_67912452..2850 [+], 399116687167hypothetical protein 
4Bcen2424_67923155..3766 [+], 612116687168hypothetical protein  TraE_F
5Bcen2424_67934030..4509 [+], 480116687169hypothetical protein  TraK_F
6Bcen2424_67944502..5824 [+], 1323116687170TraB pilus assembly family protein  TraB_F
7Bcen2424_67955817..6638 [+], 822116687171hypothetical protein 
8Bcen2424_67966635..7063 [+], 429116687172hypothetical protein 
9Bcen2424_67977060..7518 [+], 459116687173hypothetical protein 
10Bcen2424_67987853..8146 [+], 294116687174hypothetical protein 
11Bcen2424_67998224..9054 [+], 831116687175protein-disulfide isomerase 
12Bcen2424_68009057..9737 [+], 681116687176hypothetical protein  TraV_F
13Bcen2424_68019752..12346 [+], 2595116687177hypothetical protein  TraC_F
14Bcen2424_680212343..12717 [+], 375116687178hypothetical protein 
15Bcen2424_680312932..13441 [+], 510116687179Type IV secretory pathway protease TraF-like protein 
16Bcen2424_680413734..14375 [+], 642116687180hypothetical protein  TraW_F
17Bcen2424_680514422..15114 [+], 693116687181hypothetical protein 
18Bcen2424_680615111..16142 [+], 1032116687182TraU family protein  TraU_F
19Bcen2424_680716139..16927 [+], 789116687183hypothetical protein  TrbC_F
20Bcen2424_680816924..18213 [+], 1290116687184hypothetical protein 
21Bcen2424_680918210..19490 [+], 1281116687185conjugal transfer mating pair stabilization protein TraN  TraN_F
22Bcen2424_681019487..19879 [+], 393116687186hypothetical protein 
23Bcen2424_681120310..20567 [-], 258116687187hypothetical protein 
24Bcen2424_681220572..21396 [+], 825116687188hypothetical protein 
25Bcen2424_681321393..22202 [+], 810116687189hypothetical protein  TraF_F
26Bcen2424_681422202..23647 [+], 1446116687190TraH family protein  TraH_F
27Bcen2424_681523644..27585 [+], 3942116687191TraG domain-containing protein  TraG_F
28Bcen2424_681627623..28015 [-], 393116687192hypothetical protein 
29Bcen2424_681728279..28905 [+], 627116687193putative endonuclease 
30Bcen2424_681828939..29199 [+], 261116687194hypothetical protein 
31Bcen2424_681929214..31193 [+], 1980116687195zeta toxin family protein 
32Bcen2424_682031202..31618 [+], 417116687196hypothetical protein 
33Bcen2424_682131673..32071 [+], 399116687197lipoprotein 
 
Region 2: 157460..162469
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Bcen2424_6936152460..152855 [+], 396116687309hypothetical protein 
2Bcen2424_6937152870..153136 [+], 267116687310hypothetical protein 
3Bcen2424_6938153111..153662 [+], 552116687311hypothetical protein 
4Bcen2424_6939153707..153928 [+], 222116687312hypothetical protein 
5Bcen2424_6940154233..154526 [+], 294116687313hypothetical protein 
6Bcen2424_6941154528..154827 [+], 300116687314putative transcriptional regulator 
7Bcen2424_6942154992..155303 [-], 312116687315hypothetical protein 
8Bcen2424_6943157066..157467 [+], 402116687316hypothetical protein 
9Bcen2424_6944157460..159568 [+], 2109116687317Type IV secretory pathway VirD4 components-like protein  TraD_F
10Bcen2424_6945159575..162469 [+], 2895116687318TrwC protein  TraI_F
11Bcen2424_6946162883..163407 [+], 525116687319hypothetical protein 
12Bcen2424_6947163770..164387 [+], 618116687320hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_008545