SecReT4
T4SS ID528
StrainNovosphingobium aromaticivorans DSM 12444
Repliconplasmid pNL1 [Browse all T4SS(s) in this replicon]
AccessionNC_009426
Location147458..182408
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111011
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number011

The information of T4SS components from NC_009426
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Saro_3976143702..144445 [-], 744146275583hypothetical protein 
2Saro_3977144582..145625 [+], 1044146275584hypothetical protein 
3Saro_3978145679..146062 [+], 384146275585hypothetical protein 
4Saro_3979146059..146370 [+], 312146275586hypothetical protein 
5Saro_3980146430..146876 [+], 447146275587hypothetical protein 
6Saro_3981147181..147471 [+], 291146275588CopG/DNA-binding domain-containing protein 
7Saro_3982147458..149788 [+], 2331146275589Type IV secretory pathway VirD4 components-like protein  TraD_F
8Saro_3983149792..152833 [+], 3042146275590hypothetical protein  TraI_F
9Saro_3984152830..153072 [+], 243146275591hypothetical protein 
10Saro_3985153075..153278 [+], 204146275592hypothetical protein 
11Saro_3986153295..153654 [+], 360146275593hypothetical protein 
12Saro_3987153763..156204 [+], 2442146275594type III restriction enzyme, res subunit 
13Saro_3988156310..156525 [+], 216146275595hypothetical protein 
14Saro_3989156765..156956 [+], 192146275596hypothetical protein 
15Saro_3990156959..157759 [-], 801146275597GntR family transcriptional regulator 
16Saro_3991157917..158579 [+], 663146275598hypothetical protein 
17Saro_3992158684..158905 [+], 222146275599hypothetical protein 
18Saro_3994159346..160292 [+], 947146275600transposase 
19Saro_3995163015..164469 [-], 1455146275601TraH family protein  TraH_F
20Saro_3996164469..165281 [-], 813146275602hypothetical protein  TraF_F
21Saro_3997165278..165688 [-], 411146275603hypothetical protein 
22Saro_3998165669..167783 [-], 2115146275604mating pair stabilisation TraN  TraN_F
23Saro_3999167785..168549 [-], 765146275605hypothetical protein  TrbC_F
24Saro_4000168558..169580 [-], 1023146275606TraU family protein  TraU_F
25Saro_4001169577..169843 [-], 267146275607hypothetical protein 
26Saro_4002169840..170535 [-], 696146275608hypothetical protein  TraW_F
27Saro_4003170532..171074 [-], 543146275609hypothetical protein 
28Saro_4004171058..171639 [-], 582146275610hypothetical protein 
29Saro_4005171629..171991 [-], 363146275611hypothetical protein 
30Saro_4006171988..174594 [-], 2607146275612type IV secretion/conjugal transfer ATPase  TraC_F
31Saro_4007174601..175752 [-], 1152146275613hypothetical protein  TraV_F
32Saro_4008175749..176645 [-], 897146275614hypothetical protein 
33Saro_4009176656..178032 [-], 1377146275615TraB pilus assembly family protein  TraB_F
34Saro_4010178032..178826 [-], 795146275616hypothetical protein  TraK_F
35Saro_4011178826..179449 [-], 624146275617TraE family protein  TraE_F
36Saro_4012179463..179756 [-], 294146275618TraL family protein  TraL_F
37Saro_4013179813..180127 [-], 315146275619hypothetical protein 
38Saro_4014180267..181436 [+], 1170146275620hypothetical protein 
39Saro_4015181447..181722 [+], 276146275621hypothetical protein 
40Saro_4016181689..182408 [-], 720146275622lytic transglycosylase, catalytic  Orf169_F
41Saro_4017182667..183335 [-], 669146275623dimethylmenaquinone methyltransferase 
42Saro_4018183328..184026 [-], 699146275624dimethylmenaquinone methyltransferase 
43Saro_4019184019..184411 [-], 393146275625endoribonuclease L-PSP 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_009426