SecReT4
T4SS ID529
StrainShewanella baltica OS223
Repliconplasmid pS22302 [Browse all T4SS(s) in this replicon]
AccessionNC_011668
Location3829..31586
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number110

The information of T4SS components from NC_011668
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Sbal223_4417436..1416 [+], 981217980265domain of unknown function DUF1738 
2Sbal223_44191589..2536 [-], 948217980266Integrase catalytic region 
3Sbal223_44203410..3778 [+], 369217980267hypothetical protein 
4Sbal223_44213829..9789 [-], 5961217980268conjugative transfer relaxase protein TraI  TraI_F
5Sbal223_44229901..10152 [+], 252217980269hypothetical protein 
6Sbal223_442310251..10430 [-], 180217980270hypothetical protein 
7Sbal223_442410427..10705 [-], 279217980271hypothetical protein 
8Sbal223_442510733..12856 [-], 2124217980272type IV conjugative transfer system coupling protein TraD  TraD_F
9Sbal223_442612859..13392 [-], 534217980273hypothetical protein 
10Sbal223_442713430..16243 [-], 2814217980274TraG domain protein  TraG_F
11Sbal223_442816246..17634 [-], 1389217980275TraH family protein  TraH_F
12Sbal223_442917631..17819 [-], 189217980276hypothetical protein 
13Sbal223_443017830..18273 [-], 444217980277type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 
14Sbal223_443118270..19004 [-], 735217980278hypothetical protein 
15Sbal223_443219040..19915 [-], 876217980279type-F conjugative transfer system pilin assembly protein TraF  TraF_F
16Sbal223_443319912..21729 [-], 1818217980280conjugal transfer mating pair stabilization protein TraN  TraN_F
17Sbal223_443421726..22466 [-], 741217980281type-F conjugative transfer system pilin assembly protein TrbC  TrbC_F
18Sbal223_443522489..23502 [-], 1014217980282TraU family protein  TraU_F
19Sbal223_443623489..24193 [-], 705217980283type-F conjugative transfer system protein TraW  TraW_F
20Sbal223_443724190..24561 [-], 372217980284conjugal transfer protein TrbI 
21Sbal223_443824563..27151 [-], 2589217980285type-IV secretion system protein TraC  TraC_F
22Sbal223_443927155..27613 [-], 459217980286type IV conjugative transfer system protein TraV  TraV_F
23Sbal223_444027631..29157 [-], 1527217980287TraB pilus assembly family protein  TraB_F
24Sbal223_444129154..29969 [-], 816217980288type-F conjugative transfer system secretin TraK  TraK_F
25Sbal223_444229969..30535 [-], 567217980289type IV conjugative transfer system protein TraE  TraE_F
26Sbal223_444330576..30878 [-], 303217980290type IV conjugative transfer system protein TraL  TraL_F
27Sbal223_444430882..31253 [-], 372217980291hypothetical protein  TraA_F
28Sbal223_444531308..31586 [-], 279217980292hypothetical protein  TraY_F
29Sbal223_444631623..32252 [+], 630217980293putative phage repressor 
30Sbal223_444732698..33432 [+], 735217980294hypothetical protein 
31Sbal223_444834178..34333 [+], 156217980295Hok/gef cell toxic protein 
32Sbal223_444935053..35706 [+], 654217980296Methyltransferase type 12 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_011668