SecReT4
T4SS ID535
StrainShewanella baltica OS223
Repliconplasmid pS22301 [Browse all T4SS(s) in this replicon]
AccessionNC_011664
Location39422..65618
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number110

The information of T4SS components from NC_011664
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Sbal223_436635327..36526 [-], 1200217975579Cobyrinic acid ac-diamide synthase 
2Sbal223_436736695..36922 [+], 228217975580hypothetical protein 
3Sbal223_436837583..38314 [-], 732217975581hypothetical protein 
4Sbal223_436938761..38862 [-], 102217975582hypothetical protein 
5Sbal223_437039063..39320 [+], 258217975583hypothetical protein 
6Sbal223_437139422..39610 [+], 189217975584hypothetical protein  TraY_F
7Sbal223_437239674..40048 [+], 375217975585hypothetical protein  TraA_F
8Sbal223_437340052..40354 [+], 303217975586type IV conjugative transfer system protein TraL  TraL_F
9Sbal223_437440395..40961 [+], 567217975587type IV conjugative transfer system protein TraE  TraE_F
10Sbal223_437540961..41779 [+], 819217975588type-F conjugative transfer system secretin TraK  TraK_F
11Sbal223_437641776..43302 [+], 1527217975589TraB pilus assembly family protein  TraB_F
12Sbal223_437743323..43778 [+], 456217975590type IV conjugative transfer system protein TraV  TraV_F
13Sbal223_437843782..46370 [+], 2589217975591type-IV secretion system protein TraC  TraC_F
14Sbal223_437946372..46743 [+], 372217975592conjugal transfer protein TrbI 
15Sbal223_438046740..47444 [+], 705217975593type-F conjugative transfer system protein TraW  TraW_F
16Sbal223_438147431..48444 [+], 1014217975594TraU family protein  TraU_F
17Sbal223_438248467..49207 [+], 741217975595type-F conjugative transfer system pilin assembly protein TrbC  TrbC_F
18Sbal223_438349204..51006 [+], 1803217975596conjugal transfer mating pair stabilization protein TraN  TraN_F
19Sbal223_438451003..51878 [+], 876217975597type-F conjugative transfer system pilin assembly protein TraF  TraF_F
20Sbal223_438551892..52329 [+], 438217975598type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 
21Sbal223_438652341..52505 [+], 165217975599hypothetical protein 
22Sbal223_438752502..53890 [+], 1389217975600TraH family protein  TraH_F
23Sbal223_438853893..56706 [+], 2814217975601TraG domain protein  TraG_F
24Sbal223_438956744..57277 [+], 534217975602hypothetical protein 
25Sbal223_439057280..59406 [+], 2127217975603type IV conjugative transfer system coupling protein TraD  TraD_F
26Sbal223_439159420..59599 [+], 180217975604hypothetical protein 
27Sbal223_439259658..65618 [+], 5961217975605conjugative transfer relaxase protein TraI  TraI_F
28Sbal223_439365639..65998 [-], 360217975606hypothetical protein 
29Sbal223_439467489..68313 [-], 825217975607hypothetical protein 
30Sbal223_439669045..70154 [-], 1110217975608transposase IS4 family protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_011664