SecReT4
T4SS ID538
StrainShewanella baltica OS195
Repliconplasmid pS19501 [Browse all T4SS(s) in this replicon]
AccessionNC_009998
Location573..17620; 67266..75604
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number010

The information of T4SS components from NC_009998
Region 1: 573..17620
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Sbal195_45252..535 [-], 534160872935hypothetical protein 
2Sbal195_4526573..3386 [-], 2814160872936TraG domain-containing protein  TraG_F
3Sbal195_45273389..4777 [-], 1389160872937TraH family protein  TraH_F
4Sbal195_45284950..5387 [-], 438160872938type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 
5Sbal195_45295401..6276 [-], 876160872939type-F conjugative transfer system pilin assembly protein TraF  TraF_F
6Sbal195_45306273..8090 [-], 1818160872940conjugal transfer mating pair stabilization protein TraN  TraN_F
7Sbal195_45318087..8827 [-], 741160872941type-F conjugative transfer system pilin assembly protein TrbC  TrbC_F
8Sbal195_45328850..9863 [-], 1014160872942TraU family protein  TraU_F
9Sbal195_45339850..10554 [-], 705160872943type-F conjugative transfer system protein TraW  TraW_F
10Sbal195_453410551..10922 [-], 372160872944pilus assembly protein 
11Sbal195_453510924..13512 [-], 2589160872945type-IV secretion system protein TraC  TraC_F
12Sbal195_453613516..13959 [-], 444160872946type IV conjugative transfer system protein TraV  TraV_F
13Sbal195_453713992..15518 [-], 1527160872947TraB pilus assembly family protein  TraB_F
14Sbal195_453815515..16333 [-], 819160872948type-F conjugative transfer system secretin TraK  TraK_F
15Sbal195_453916333..16899 [-], 567160872949type IV conjugative transfer system protein TraE  TraE_F
16Sbal195_454016940..17242 [-], 303160872950type IV conjugative transfer system protein TraL  TraL_F
17Sbal195_454117246..17620 [-], 375160872951hypothetical protein  TraA_F
18Sbal195_454217974..18231 [-], 258160872952hypothetical protein 
19Sbal195_454318351..18533 [+], 183160872953hypothetical protein 
20Sbal195_454418980..19711 [+], 732160872954hypothetical protein 
21Sbal195_454520373..20603 [-], 231160872955hypothetical protein 
22Sbal195_454620769..21968 [+], 1200160872956cobyrinic acid ac-diamide synthase 
 
Region 2: 67266..75604
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Sbal195_458362281..63210 [+], 930160872992hypothetical protein 
2Sbal195_458463212..63613 [+], 402160872993hypothetical protein 
3Sbal195_458563806..64051 [+], 246160872994HicA protein 
4Sbal195_458664048..64386 [+], 339160872995HicB family protein 
5Sbal195_458764675..65979 [+], 1305160872996hypothetical protein 
6Sbal195_458866028..66327 [+], 300160872997hypothetical protein 
7Sbal195_458966307..66453 [-], 147160872998hypothetical protein 
8Sbal195_459066886..67245 [+], 360160872999hypothetical protein 
9Sbal195_459167266..73226 [-], 5961160873000conjugative transfer relaxase protein TraI  TraI_F
10Sbal195_459273478..75604 [-], 2127160873001type IV conjugative transfer system coupling protein TraD  TraD_F
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_009998