T4SS ID540
StrainLegionella pneumophila subsp. pneumophila str. Philadelphia 1
Repliconchromosome [Browse all T4SS(s) in this replicon]
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components

The information of T4SS components from NC_002942
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1lpg20732314344..2315951 [-], 160852842287hypothetical protein 
2lpg20742315954..2316583 [-], 630528422884-diphosphocytidyl-2C-methyl-D-erythritol synthase 
3lpg2075 (dam)2316456..2317292 [-], 83752842289DNA adenine methylase 
4lpg20762317885..2318976 [-], 109252842290hypothetical protein 
5lpg20772319208..2325153 [-], 594652842291hypothetical protein  TraI_F
6lpg20782325174..2327066 [-], 189352842292hypothetical protein  TraD_F
7lpg2079 (traG)2327599..2330328 [-], 273052842293hypothetical protein  TraG_F
8lpg2080 (traH)2330325..2331710 [-], 138652842294hypothetical protein  TraH_F
9lpg2081 (traF)2331707..2332129 [-], 42352842295sex pilus assembly TraF, thiol-disulfide isomerase and thioredoxins  TraF_F
10lpg2082 (traF)2332119..2332901 [-], 78352842296pilus assembly protein TraF  TraF_F
11lpg2083 (traN)2332894..2334705 [-], 181252842297conjugal transfer protein TraN  TraN_F
12lpg20842334705..2335376 [-], 67252842298conjugative transfer protein TrbC  TrbC_F
13lpg2085 (traU)2335389..2336384 [-], 99652842299hypothetical protein  TraU_F
14lpg20862336381..2336989 [-], 60952842300hypothetical protein  TraW_F
15lpg2087 (traC)2337314..2339911 [-], 259852842301hypothetical protein  TraC_F
16lpg2088 (traV)2339878..2340228 [-], 35152842302conjugative transfer: assembly  TraV_F
17lpg20892340242..2341561 [-], 132052842303conjugative transfer protein TraB  TraB_F
18lpg20902341530..2342243 [-], 71452842304conjugative transfer protein TraK  TraK_F
19lpg20912342246..2342809 [-], 56452842305conjugative transfer protein TraE  TraE_F
20lpg20922342813..2343106 [-], 29452842306sex pilus assembly protein-like  TraL_F
21lpg20932343108..2343410 [-], 30352842307fimbrial protein -like  TraA_F
22lpg2094 (csrA)2343425..2343661 [-], 23752842308carbon storage regulator RsmA 
23lpg2095 (lvrA)2344000..2344884 [-], 88552842309protein LvrA 
24lpg20962345033..2345737 [+], 70552842310prophage repressor CI-like 
25lpg20972345877..2346560 [+], 68452842311hypothetical protein 
26lpg20982347009..2347581 [+], 57352842312MsrA3 - peptide methionine sulfoxide reductase 
27lpg20992347541..2348062 [+], 52252842313methionine sulfoxide reductase B 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Brassinga AK; Hiltz MF; Sisson GR; Morash MG; Hill N; Garduno E; Edelstein PH; Garduno RA; Hoffman PS (2003). A 65-kilobase pathogenicity island is unique to Philadelphia-1 strains of Legionella pneumophila. J Bacteriol. 185(15):4630-7. [PudMed:12867476] in_silico
in_silico This literature contains bioinformatics investigation