SecReT4
T4SS ID542
StrainPhotobacterium profundum SS9
Repliconplasmid pPBPR1 [Browse all T4SS(s) in this replicon]
AccessionNC_005871
Location317..29434
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111101
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number100101110
ComponentTraY_FTrbC_FOrf169_F
Number110

The information of T4SS components from NC_005871
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PBPRC0001317..709 [+], 39347104026putative sex pilus assembly and synthesis protein (TraY)  TraY_F
2PBPRC0002917..1201 [-], 28547104027hypothetical protein 
3PBPRC00031503..1775 [+], 27347104028hypothetical protein  TraA_F
4PBPRC00042007..2654 [+], 64847104029sex pilus assembly and synthesis protein TraE  TraE_F
5PBPRC00052651..3385 [+], 73547104030hypothetical protein  TraK_F
6PBPRC00063379..4848 [+], 147047104031putative sex pilus assembly and synthesis protein TraB  TraB_F
7PBPRC00074860..5255 [+], 39647104032hypothetical protein  TraV_F
8PBPRC00085259..7847 [+], 258947104033putative sex pilus assembly and synthesis protein TraC  TraC_F
9PBPRC00097943..8359 [-], 41747104034hypothetical protein 
10PBPRC00108406..9104 [+], 69947104035sex pilus assembly and synthesis protein TraW  TraW_F
11PBPRC00119108..10112 [+], 100547104036putative sex pilus assembly and synthesis protein TraU  TraU_F
12PBPRC001210303..11007 [+], 70547104037conjugative transfer protein TrbC  TrbC_F
13PBPRC001311009..12811 [+], 180347104038conjugal transfer mating pair stabilization protein TraN  TraN_F
14PBPRC001412808..13599 [+], 79247104039sex pilus assembly and synthesis protein TraF  TraF_F
15PBPRC001513611..14051 [+], 44147104040putative thiol-disulfide isomerase 
16PBPRC001615384..18218 [+], 283547104041putative sex pilus assembly and mating pair TraG  TraG_F
17PBPRC001718222..18701 [-], 48047104042hypothetical protein 
18PBPRC001818779..19150 [+], 37247104043hypothetical protein 
19PBPRC001919147..21252 [+], 210647104044conjugative transfer protein TraD  TraD_F
20PBPRC002021670..22164 [+], 49547104045hypothetical protein 
21PBPRC002122182..23342 [-], 116147104046hypothetical protein 
22PBPRC002223492..29434 [+], 594347104047DNA helicase TraI  TraI_F
23PBPRC002329463..29849 [-], 38747104048hypothetical protein 
24PBPRC002430909..31367 [-], 45947104049hypothetical protein 
25PBPRC002531938..32915 [-], 97847104050putative antirestriction protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_005871