SecReT4
T4SS ID547
StrainParvularcula bermudensis HTCC2503
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_014414
Location8800..46320
NameTra_F
FunctionNA
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number010

The information of T4SS components from NC_014414
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PB2503_005274218..4526 [+], 309304319684hypothetical protein 
2PB2503_005324516..5061 [+], 546304319685hypothetical protein 
3PB2503_005375154..5237 [-], 84304319686hypothetical protein 
4PB2503_005425347..5736 [+], 390304319687IS 426 transposase 
5PB2503_005475733..5939 [+], 207304319688hypothetical protein 
6PB2503_005526121..6615 [+], 495304319689hypothetical protein 
7PB2503_005576526..7182 [-], 657304319690hypothetical protein 
8PB2503_005627351..7797 [+], 447304319691single-stranded DNA-binding protein 
9PB2503_005677757..8071 [-], 315304319692hypothetical protein 
10PB2503_005728223..8504 [+], 282304319693hypothetical protein 
11PB2503_005778501..8803 [+], 303304319694hypothetical protein 
12PB2503_005828800..10839 [+], 2040304319695protein TraD  TraD_F
13PB2503_0058710839..13823 [+], 2985304319696TrwC protein  TraI_F
14PB2503_0059213899..16019 [-], 2121304319697ATP-dependent helicase 
15PB2503_0059716067..17380 [-], 1314304319698hypothetical protein 
16PB2503_0060217380..20154 [-], 2775304319699plasma membrane H+-transporting two-sector ATPase, subunit C 
17PB2503_0060720779..22344 [+], 1566304319700hypothetical protein 
18PB2503_0061222349..23203 [+], 855304319701hypothetical protein 
19PB2503_0061723787..24617 [-], 831304319702hypothetical protein 
20PB2503_0062224712..25878 [+], 1167304319703hypothetical protein 
21PB2503_0062725875..27644 [+], 1770304319704hypothetical protein 
22PB2503_0063228174..28584 [+], 411304319705hypothetical protein 
23PB2503_0063728594..31512 [-], 2919304319706protein TraG  TraG_F
24PB2503_0064231524..32942 [-], 1419304319707protein TraH  TraH_F
25PB2503_0064732927..33235 [-], 309304319708hypothetical protein 
26PB2503_0065233235..34020 [-], 786304319709hypothetical protein  TraF_F
27PB2503_0065733992..35809 [-], 1818304319710hypothetical protein  TraN_F
28PB2503_0066235806..36531 [-], 726304319711hypothetical protein  TrbC_F
29PB2503_0066736542..37543 [-], 1002304319712conjugative transfer protein TraU  TraU_F
30PB2503_0067237540..38157 [-], 618304319713hypothetical protein  TraW_F
31PB2503_0067738111..38620 [-], 510304319714hypothetical protein 
32PB2503_0068238617..39141 [-], 525304319715hypothetical protein 
33PB2503_0068739134..39448 [-], 315304319716hypothetical protein 
34PB2503_0069239435..42008 [-], 2574304319717protein TraC  TraC_F
35PB2503_0069741998..42459 [-], 462304319718hypothetical protein  TraV_F
36PB2503_0070242456..43217 [-], 762304319719protein-disulfide isomerase 
37PB2503_0070743444..44700 [-], 1257304319720conjugative transfer factor, TraB  TraB_F
38PB2503_0071244697..45428 [-], 732304319721hypothetical protein  TraK_F
39PB2503_0071745425..46024 [-], 600304319722hypothetical protein  TraE_F
40PB2503_0072246027..46320 [-], 294304319723hypothetical protein  TraL_F
41PB2503_0072746448..46774 [-], 327304319724hypothetical protein 
42PB2503_0073246777..46878 [+], 102304319725hypothetical protein 
43PB2503_0073747170..47559 [+], 390304319726hypothetical protein 
44PB2503_0074247705..48094 [+], 390304319727hypothetical protein 
45PB2503_0074748091..48369 [-], 279304319728hypothetical protein 
46PB2503_0075248714..50117 [-], 1404304319729phage integrase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Oh HM; Kang I; Vergin KL; Kang D; Rhee KH; Giovannoni SJ; Cho JC (2011). Complete genome sequence of strain HTCC2503T of Parvularcula bermudensis, the type species of the order "Parvularculales" in the class Alphaproteobacteria. J Bacteriol. 193(1):305-6. [PudMed:21037002]