SecReT4
T4SS ID550
StrainAlicycliphilus denitrificans K601
Repliconplasmid pALIDE201 [Browse all T4SS(s) in this replicon]
AccessionNC_015423
Location396..29360
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number011

The information of T4SS components from NC_015423
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Alide2_475017..394 [+], 378330827326hypothetical protein 
2Alide2_4751396..2393 [+], 1998330827327type IV secretion system protein TraD  TraD_F
3Alide2_47522405..2860 [+], 456330827328putative thiol:disulfide interchange transmembrane protein 
4Alide2_47532857..5742 [+], 2886330827329conjugative relaxase domain-containing protein  TraI_F
5Alide2_47545884..6096 [+], 213330827330hypothetical protein 
6Alide2_47556187..7041 [+], 855330827331YheO-like domain-containing protein 
7Alide2_47567074..7349 [+], 276330827332hypothetical protein 
8Alide2_47577358..8326 [+], 969330827333integral membrane sensor signal transduction histidine kinase 
9Alide2_47588295..8954 [-], 660330827334two component LuxR family transcriptional regulator 
10Alide2_47599438..9938 [+], 501330827335lytic transglycosylase catalytic subunit  Orf169_F
11Alide2_47609940..10323 [+], 384330827336hypothetical protein 
12Alide2_476110418..10750 [+], 333330827337Conjugal transfer protein TrbC 
13Alide2_476210766..11059 [+], 294330827338type IV conjugative transfer system protein TraL  TraL_F
14Alide2_476311074..11667 [+], 594330827339hypothetical protein  TraE_F
15Alide2_476411777..12340 [+], 564330827340hypothetical protein  TraK_F
16Alide2_476512333..13682 [+], 1350330827341conjugation TrbI family protein  TraB_F
17Alide2_476613675..14424 [+], 750330827342disulfide bond isomerase, DsbC/G 
18Alide2_476714421..14570 [+], 150330827343hypothetical protein 
19Alide2_476814567..15217 [+], 651330827344type IV conjugative transfer system protein TraV  TraV_F
20Alide2_476915255..17879 [+], 2625330827345type-IV secretion system protein TraC  TraC_F
21Alide2_477017869..18297 [+], 429330827346hypothetical protein 
22Alide2_477118297..18773 [+], 477330827347peptidase S26 
23Alide2_477218760..19398 [+], 639330827348type-F conjugative transfer system protein TraW  TraW_F
24Alide2_477319395..20396 [+], 1002330827349TraU family protein  TraU_F
25Alide2_477420396..21172 [+], 777330827350type-F conjugative transfer system pilin assembly protein TrbC  TrbC_F
26Alide2_477521169..22467 [+], 1299330827351hypothetical protein 
27Alide2_477622464..23708 [+], 1245330827352Mating pair stabilization TraN  TraN_F
28Alide2_477723705..24067 [+], 363330827353hypothetical protein 
29Alide2_477824072..24884 [+], 813330827354hypothetical protein  TraF_F
30Alide2_477924895..26301 [+], 1407330827355TraH family protein  TraH_F
31Alide2_478026313..29360 [+], 3048330827356TraG domain-containing protein  TraG_F
32Alide2_478129696..29950 [-], 255330827357hypothetical protein 
33Alide2_478230439..31164 [+], 726330827358peptidase M48 Ste24p 
34Alide2_478331172..31432 [+], 261330827359hypothetical protein 
35Alide2_478431432..31851 [+], 420330827360hypothetical protein 
36Alide2_478531848..32372 [+], 525330827361hypothetical protein 
37Alide2_478632396..32764 [+], 369330827362hypothetical protein 
38Alide2_478732890..33135 [+], 246330827363hypothetical protein 
39Alide2_478833148..33375 [+], 228330827364hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_015423