SecReT4
T4SS ID551
StrainCandidatus Protochlamydia amoebophila UWE25
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_005861
Location1697757..1716241
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111110
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101010
ComponentTraY_FTrbC_FOrf169_F
Number010

The information of T4SS components from NC_005861
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pc14181693840..1694943 [+], 110446447052hypothetical protein 
2pc14191695418..1696245 [+], 82846447053hypothetical protein 
3pc14201696410..1696814 [-], 40546447054hypothetical protein 
4pc14211697418..1697735 [+], 31846447055hypothetical protein 
5pc14221697757..1698062 [+], 30646447056hypothetical protein  TraL_F
6pc1423 (traE)1698071..1698640 [+], 57046447057F pilus assembly protein traE  TraE_F
7pc14241698641..1699333 [+], 69346447058hypothetical protein  TraK_F
8pc1425 (traB)1699404..1700630 [+], 122746447059F pilus assembly protein traB  TraB_F
9pc14261700887..1701381 [-], 49546447060hypothetical protein 
10pc14271701456..1701896 [-], 44146447061hypothetical protein 
11pc14281701958..1702431 [+], 47446447062hypothetical protein 
12pc14291702424..1702798 [+], 37546447063hypothetical protein 
13pc1430 (traC)1702800..1705286 [+], 248746447064inner-membrane protein traC  TraC_F
14pc1431 (traF)1705274..1705756 [+], 48346447065F pilus assembly protein traF 
15pc1432 (traW)1705741..1706373 [+], 63346447066F pilus assembly protein traW  TraW_F
16pc1433 (trbC)1706382..1706978 [+], 59746447067F pilus assembly protein trbC  TrbC_F
17pc1434 (traU)1707047..1707982 [+], 93646447068F pilus assembly protein traU  TraU_F
18pc14351707925..1708692 [+], 76846447069hypothetical protein 
19pc14361708784..1708969 [+], 18646447070hypothetical protein 
20pc1437 (traN)1709083..1709637 [+], 55546447071conjugative transfer protein traN  TraN_F
21pc1438 (traF)1709634..1710425 [+], 79246447072F pilus assembly protein traF  TraF_F
22pc1439 (traH)1710422..1711780 [+], 135946447073F pilus assembly protein traH  TraH_F
23pc1440 (traG)1711791..1714574 [+], 278446447074conjugative transfer protein traG  TraG_F
24pc1441 (traD)1714571..1716241 [+], 167146447075conjugative transfer protein traD  TraD_F
25pc14421716302..1716655 [+], 35446447076hypothetical protein 
26pc14431716648..1717004 [+], 35746447077hypothetical protein 
27pc14441717137..1717400 [+], 26446447078hypothetical protein 
28pc14451717579..1717860 [+], 28246447079hypothetical protein 
29pc14461718022..1718702 [+], 68146447080hypothetical protein 
30pc14471718994..1719326 [+], 33346447081hypothetical protein 
31pc14481719350..1720123 [+], 77446447082hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Greub G; Collyn F; Guy L; Roten CA (2004). A genomic island present along the bacterial chromosome of the Parachlamydiaceae UWE25, an obligate amoebal endosymbiont, encodes a potentially functional F-like conjugative DNA transfer system. BMC Microbiol. 4:48. [PudMed:15615594]