SecReT4
T4SS ID552
StrainSyntrophus aciditrophicus SB
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_007759
Location1740702..1765815
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011011110
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number001

The information of T4SS components from NC_007759
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SYN_018551736672..1737712 [+], 104185859513DeoR family transcriptional regulator 
2SYN_018561737764..1738783 [+], 102085859514cytoplasmic protein 
3SYN_018571739002..1739682 [+], 68185859515OmpA family outer membrane protein 
4SYN_018581739692..1740411 [+], 72085859516protein-disulfide isomerase 
5SYN_018591740413..1740730 [+], 31885859517hypothetical protein 
6SYN_018601740702..1741010 [+], 30985859518hypothetical protein  TraL_F
7SYN_018611741007..1741591 [+], 58585859519sex pilus assembly/synthesis protein  TraE_F
8SYN_018621741588..1742442 [+], 85585859520hypothetical protein  TraK_F
9SYN_018631742432..1743625 [+], 119485859521pilus assembly protein  TraB_F
10SYN_018641743622..1744065 [+], 44485859522hypothetical protein  TraV_F
11SYN_018651744023..1746557 [+], 253585859523sex pilus assembly protein  TraC_F
12SYN_018661746508..1748529 [+], 202285859524hypothetical protein 
13SYN_018671748529..1752758 [+], 423085859525hypothetical protein  TraN_F
14SYN_018681752736..1753569 [+], 83485859526cytoplasmic protein  TraW_F
15SYN_018691753532..1754551 [+], 102085859527conjugal DNA transfer protein  TraU_F
16SYN_018701754437..1755396 [+], 96085859528cytoplasmic protein 
17SYN_018711755393..1755791 [+], 39985859529hypothetical protein 
18SYN_018721755760..1756245 [+], 48685859530type IV secretory protease 
19SYN_018731756226..1757128 [+], 90385859531hypothetical protein  TraF_F
20SYN_018741757139..1758605 [+], 146785859532pilus assembly protein  TraH_F
21SYN_018751758625..1761663 [+], 303985859533DNA transfer and F pilus assembly protein  TraG_F
22SYN_018761761693..1761998 [+], 30685859534cytoplasmic protein 
23SYN_018771762048..1762920 [+], 87385859535transcriptional regulator 
24SYN_018791762898..1763791 [+], 89485859536cytoplasmic protein 
25SYN_018801763788..1764042 [+], 25585859537hypothetical protein 
26SYN_018811764153..1764539 [-], 38785859538Cro/CI family transcriptional regulator 
27SYN_018821764555..1764764 [-], 21085859539cytoplasmic protein 
28SYN_018831764942..1765289 [+], 34885859540DNA topoisomerase III 
29SYN_018841765405..1765815 [+], 41185859541soluble lytic murein transglycosylase  Orf169_F
30SYN_018851765812..1766564 [+], 75385859542cytoplasmic protein 
31SYN_018861766561..1767922 [+], 136285859543DNA transfer in the process of conjugation and F pilus assembly protein 
32SYN_018871767919..1769310 [+], 139285859544metal dependent phosphohydrolases 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) McInerney MJ; Rohlin L; Mouttaki H; Kim U; Krupp RS; Rios-Hernandez L; Sieber J; Struchtemeyer CG; Bhattacharyya A; Campbell JW; Gunsalus RP (2007). The genome of Syntrophus aciditrophicus: life at the thermodynamic limit of microbial growth. Proc Natl Acad Sci U S A. 104(18):7600-5. [PudMed:17442750]