SecReT4
T4SS ID553
StrainRickettsia massiliae MTU5
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_009900
Location710788..735615
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number000101100
ComponentTraY_FTrbC_FOrf169_F
Number010

The information of T4SS components from NC_009900
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1RMA_0713707761..708921 [+], 1161157964586integrase 
2RMA_0714709137..709760 [+], 624157964587Phage-associated protein 
3RMA_0715709757..710017 [+], 261157964588putative toxin of toxin-antitoxin 
4RMA_0716710474..710788 [+], 315157964589hypothetical protein 
5RMA_0717 (traE)710788..711342 [+], 555157964590conjugative transfer protein TraE  TraE_F
6RMA_0718711339..711794 [+], 456157964591hypothetical protein 
7RMA_0719711733..712086 [+], 354157964592hypothetical protein 
8RMA_0720 (traB)712111..713523 [+], 1413157964593F pilus assembly protein TraB  TraB_F
9RMA_0721 (traV)713523..713762 [+], 240157964594conjugative transfer protein TraV  TraV_F
10RMA_0722713762..716281 [+], 2520157964595conjugative transfer protein TraC  TraC_F
11RMA_0723716369..717955 [+], 1587157964596ATPase family protein 
12RMA_0726 (traU)719018..719998 [+], 981157964597conjugal DNA transfer protein TraU  TraU_F
13RMA_0727 (trbC)719983..720450 [+], 468157964598conjugative transfer protein TrbC  TrbC_F
14RMA_0728 (traN)720420..722246 [+], 1827157964599conjugative transfer protein TraN  TraN_F
15RMA_0729 (traF)722212..723123 [+], 912157964600F pilus assembly protein TraF  TraF_F
16RMA_0730 (traH)723138..724478 [+], 1341157964601F pilus assembly protein TraH  TraH_F
17RMA_0731 (traG)724557..727286 [+], 2730157964602conjugative transfer protein TraG  TraG_F
18RMA_0732727264..728466 [+], 1203157964603hypothetical protein 
19RMA_0733 (traD_F)728456..730162 [+], 1707157964604putative conjugative transfer protein TraD  TraD_F
20RMA_0734730392..731435 [-], 1044157964605transposase 
21RMA_0735 (traA_Ti)731479..735615 [-], 4137157964606conjugal transfer protein TraA  TraI_F
22RMA_0736736269..737219 [+], 951157964607transposase 
23RMA_0739738541..739035 [-], 495157964608hypothetical protein 
24RMA_0740739025..739786 [-], 762157964609transposase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Blanc G; Ogata H; Robert C; Audic S; Claverie JM; Raoult D (2007). Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genome. Genome Res. 17(11):1657-64. [PudMed:17916642]