SecReT4
T4SS ID555
StrainNovosphingobium aromaticivorans DSM 12444
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_007794
Location2295560..2328365
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110001110
ComponentTraY_FTrbC_FOrf169_F
Number000

The information of T4SS components from NC_007794
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Saro_21492291907..2292542 [+], 63687200165hypothetical protein 
2Saro_21502292560..2292910 [-], 35187200166hypothetical protein 
3Saro_21512292907..2293533 [-], 62787200167cation efflux protein 
4Saro_21522293603..2294016 [+], 41487200168MerR family transcriptional regulator 
5Saro_21532294101..2294346 [-], 24687200169phage transcriptional regulator AlpA 
6Saro_21542294394..2294855 [-], 46287200170hypothetical protein 
7Saro_21552295204..2295533 [+], 33087200171hypothetical protein 
8Saro_21562295560..2295847 [+], 28887200172hypothetical protein  TraL_F
9Saro_21572295859..2296431 [+], 57387200173hypothetical protein  TraE_F
10Saro_21582296431..2297189 [+], 75987200174hypothetical protein  TraK_F
11Saro_21592297182..2298522 [+], 134187200175TraB pilus assembly  TraB_F
12Saro_21602298519..2299433 [+], 91587200176hypothetical protein 
13Saro_21612299438..2300247 [+], 81087200177hypothetical protein  TraV_F
14Saro_21622300247..2302790 [+], 254487200178ATPase  TraC_F
15Saro_21632302820..2303212 [+], 39387200179hypothetical protein 
16Saro_21642303209..2303616 [+], 40887200180hypothetical protein 
17Saro_21652303603..2304127 [+], 52587200181Type IV secretory pathway protease TraF-like  TraF_F
18Saro_21662304124..2304771 [+], 64887200182hypothetical protein  TraW_F
19Saro_21672304768..2305883 [+], 111687200183hypothetical protein  TraU_F
20Saro_21682305885..2307321 [+], 143787200184hypothetical protein  TraH_F
21Saro_21692307355..2310057 [+], 270387200185TraG-like  TraG_F
22Saro_21702310068..2310298 [-], 23187200186hypothetical protein 
23Saro_21712310400..2310762 [-], 36387200187hypothetical protein 
24Saro_21722310734..2313502 [-], 276987200188helicase-like protein 
25Saro_21732313519..2316458 [-], 294087200189DNA methylase containing a Zn-ribbon 
26Saro_21742316468..2317040 [-], 57387200190hypothetical protein 
27Saro_21752317040..2320144 [-], 310587200191hypothetical protein 
28Saro_21762320276..2321145 [-], 87087200192hypothetical protein 
29Saro_21772321259..2321453 [-], 19587200193hypothetical protein 
30Saro_21782321554..2322195 [+], 64287200194phage repressor 
31Saro_21792322489..2322932 [+], 44487200195hypothetical protein 
32Saro_21802322932..2323129 [+], 19887200196hypothetical protein 
33Saro_21812323154..2323393 [-], 24087200197hypothetical protein 
34Saro_21822323464..2324249 [-], 78687200198hypothetical protein 
35Saro_21832324303..2325931 [-], 162987200199TrwC protein  TraI_F
36Saro_21842325969..2328365 [-], 239787200200Type IV secretory pathway VirD4 components-like protein  TraD_F
37Saro_21852328355..2328687 [-], 33387200201hypothetical protein 
38Saro_21862328903..2329247 [+], 34587200202hypothetical protein 
39Saro_21872329126..2329320 [+], 19587200203hypothetical protein 
40Saro_21882329423..2329659 [-], 23787200204hypothetical protein 
41Saro_21892329845..2330213 [+], 36987200205hypothetical protein 
42Saro_21902330329..2330718 [-], 39087200206single-strand binding protein 
43Saro_21912331079..2331507 [-], 42987200207hypothetical protein 
44Saro_21922331518..2331979 [-], 46287200208hypothetical protein 
45Saro_21932332102..2333055 [-], 95487200209hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_007794