SecReT4
T4SS ID562
StrainOrientia tsutsugamushi str. Ikeda
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010793
Location1729740..1740903
NameTra_F
FunctionNA
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number022011120
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number000101110
ComponentTraY_FTrbC_FOrf169_F
Number010

The information of T4SS components from NC_010793
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1OTT_16991724810..1725481 [-], 672189184606hypothetical protein 
2OTT_17001726048..1727247 [+], 1200189184607integrase 
3OTT_17011727368..1727703 [+], 336189184608hypothetical protein 
4OTT_17021727703..1728254 [+], 552189184609conjugative transfer protein TraE  TraE_F
5OTT_17031728251..1728727 [+], 477189184610hypothetical protein 
6OTT_17041729092..1729421 [+], 330189184611hypothetical protein 
7OTT_17051729740..1730558 [+], 819189184612conjugative transfer protein TraB  TraB_F
8OTT_17061730521..1730790 [+], 270189184613conjugative transfer protein TraB  TraB_F
9OTT_17071730790..1731119 [+], 330189184614hypothetical protein  TraV_F
10OTT_17081731100..1733112 [+], 2013189184615conjugative transfer protein TraC  TraC_F
11OTT_17091733281..1733589 [+], 309189184616conjugative transfer protein TraC  TraC_F
12OTT_17101733586..1734245 [+], 660189184617conjugative transfer protein TraW  TraW_F
13OTT_17111734332..1734535 [+], 204189184618hypothetical protein 
14OTT_17121734536..1735513 [+], 978189184619conjugative transfer protein TraU  TraU_F
15OTT_17131735536..1735919 [+], 384189184620conjugative transfer protein TrbC  TrbC_F
16OTT_17141735916..1737607 [+], 1692189184621conjugative transfer protein TraN  TraN_F
17OTT_17151737604..1738302 [+], 699189184622conjugative transfer protein TraF  TraF_F
18OTT_17161738299..1738928 [+], 630189184623conjugative transfer protein TraH  TraH_F
19OTT_17171738978..1739322 [+], 345189184624conjugative transfer protein TraH  TraH_F
20OTT_17181739379..1739753 [+], 375189184625transposase 
21OTT_17191739740..1740246 [+], 507189184626transposase 
22OTT_17201740356..1740568 [+], 213189184627conjugative transfer protein TraH 
23OTT_17211740568..1740903 [+], 336189184628conjugative transfer protein TraG  TraG_F
24OTT_17221741080..1742042 [+], 963189184629transposase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Nakayama K; Yamashita A; Kurokawa K; Morimoto T; Ogawa M; Fukuhara M; Urakami H; Ohnishi M; Uchiyama I; Ogura Y; Ooka T; Oshima K; Tamura A; Hattori M; Hayashi T (2008). The Whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution. DNA Res. 15(4):185-99. [PudMed:18508905]