SecReT4
T4SS ID563
StrainOrientia tsutsugamushi str. Ikeda
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010793
Location1506773..1531266
NameTra_F
FunctionNA
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number021111221
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number000101100
ComponentTraY_FTrbC_FOrf169_F
Number010

The information of T4SS components from NC_010793
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1OTT_14721501815..1502189 [-], 375189184379transposase 
2OTT_14731502254..1502757 [+], 504189184380hypothetical protein 
3OTT_14741502780..1503001 [+], 222189184381hypothetical protein 
4OTT_14751502998..1503264 [+], 267189184382hypothetical protein 
5OTT_14761503712..1503888 [+], 177189184383N6 adenine-specific DNA-methyltransferase 
6OTT_14771504318..1504734 [+], 417189184384RelA/SpoT-related protein 
7OTT_14781505350..1506078 [+], 729189184385ankyrin repeat-containing protein 17 
8OTT_14791506132..1506587 [-], 456189184386conjugative transfer protein TraD 
9OTT_14801506773..1508752 [+], 1980189184387conjugative transfer protein TraA  TraI_F
10OTT_14811508974..1510758 [-], 1785189184388hypothetical protein 
11OTT_14821511405..1512475 [+], 1071189184389conjugative transfer protein TraI 
12OTT_14831512460..1513488 [+], 1029189184390transposase 
13OTT_14841513498..1515252 [-], 1755189184391conjugative transfer protein TraD  TraD_F
14OTT_14851515258..1516403 [-], 1146189184392TPR repeat-containing protein 01_09 
15OTT_14861516419..1518770 [-], 2352189184393conjugative transfer protein TraG  TraG_F
16OTT_14871518853..1519815 [-], 963189184394transposase 
17OTT_14881519992..1520327 [-], 336189184395conjugative transfer protein TraG  TraG_F
18OTT_14891520327..1520812 [-], 486189184396conjugative transfer protein TraH  TraH_F
19OTT_14901521001..1521630 [-], 630189184397conjugative transfer protein TraH  TraH_F
20OTT_14911521627..1522325 [-], 699189184398conjugative transfer protein TraF  TraF_F
21OTT_14921522322..1522957 [-], 636189184399conjugative transfer protein TraN  TraN_F
22OTT_14931523246..1524013 [-], 768189184400conjugative transfer protein TraN 
23OTT_14941524010..1524393 [-], 384189184401conjugative transfer protein TrbC  TrbC_F
24OTT_14951524416..1525003 [-], 588189184402conjugative transfer protein TraU  TraU_F
25OTT_14961525158..1526168 [+], 1011189184403ankyrin repeat-containing protein 06_03 
26OTT_14971526067..1527938 [-], 1872189184404conjugative transfer protein TraC  TraC_F
27OTT_14981527850..1528179 [-], 330189184405hypothetical protein  TraV_F
28OTT_14991528179..1528448 [-], 270189184406conjugative transfer protein TraB  TraB_F
29OTT_15001528411..1529229 [-], 819189184407conjugative transfer protein TraB  TraB_F
30OTT_15011529548..1529877 [-], 330189184408hypothetical protein 
31OTT_15021530242..1530718 [-], 477189184409hypothetical protein 
32OTT_15031530715..1531266 [-], 552189184410conjugative transfer protein TraE  TraE_F
33OTT_15041531266..1531601 [-], 336189184411hypothetical protein 
34OTT_15051531727..1532173 [-], 447189184412integrase 
35OTT_15061532198..1532773 [-], 576189184413integrase 
36OTT_15071533355..1533837 [-], 483189184414transposase 
37OTT_15081533945..1535111 [-], 1167189184415hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Nakayama K; Yamashita A; Kurokawa K; Morimoto T; Ogawa M; Fukuhara M; Urakami H; Ohnishi M; Uchiyama I; Ogura Y; Ooka T; Oshima K; Tamura A; Hattori M; Hayashi T (2008). The Whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution. DNA Res. 15(4):185-99. [PudMed:18508905]