SecReT4
T4SS ID564
StrainOrientia tsutsugamushi str. Ikeda
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010793
Location1162791..1185104
NameTra_F
FunctionNA
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111221
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number000101100
ComponentTraY_FTrbC_FOrf169_F
Number010

The information of T4SS components from NC_010793
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1OTT_11271158279..1158866 [+], 588189184034RelA/SpoT-related protein 
2OTT_11281159093..1159950 [+], 858189184035hypothetical protein 
3OTT_11291160117..1160293 [-], 177189184036conjugative transfer protein TraD 
4OTT_11301160637..1161029 [+], 393189184037hypothetical protein 
5OTT_11311161260..1161559 [+], 300189184038hypothetical protein 
6OTT_11321161618..1162073 [-], 456189184039conjugative transfer protein TraD 
7OTT_11331162368..1162766 [+], 399189184040conjugative transfer protein TraA 
8OTT_11341162791..1165196 [+], 2406189184041conjugative transfer protein TraA  TraI_F
9OTT_11351165465..1168137 [+], 2673189184042conjugative transfer protein TraI 
10OTT_11361168122..1169114 [+], 993189184043transposase 
11OTT_11371169124..1170878 [-], 1755189184044conjugative transfer protein TraD  TraD_F
12OTT_11381170884..1172029 [-], 1146189184045TPR repeat-containing protein 01_07 
13OTT_11391172045..1174396 [-], 2352189184046conjugative transfer protein TraG  TraG_F
14OTT_11401174479..1175441 [-], 963189184047transposase 
15OTT_11411175618..1175953 [-], 336189184048conjugative transfer protein TraG  TraG_F
16OTT_11421175953..1176432 [-], 480189184049conjugative transfer protein TraH  TraH_F
17OTT_11431176627..1177256 [-], 630189184050conjugative transfer protein TraH  TraH_F
18OTT_11441177253..1177951 [-], 699189184051conjugative transfer protein TraF  TraF_F
19OTT_11451177948..1178583 [-], 636189184052conjugative transfer protein TraN  TraN_F
20OTT_11461178872..1179639 [-], 768189184053conjugative transfer protein TraN 
21OTT_11471179636..1179956 [-], 321189184054conjugative transfer protein TrbC  TrbC_F
22OTT_11481180041..1180628 [-], 588189184055conjugative transfer protein TraU  TraU_F
23OTT_11491180783..1181793 [+], 1011189184056ankyrin repeat-containing protein 06_02 
24OTT_11501181692..1183563 [-], 1872189184057conjugative transfer protein TraC  TraC_F
25OTT_11511183475..1183804 [-], 330189184058hypothetical protein  TraV_F
26OTT_11521183804..1184073 [-], 270189184059conjugative transfer protein TraB  TraB_F
27OTT_11531184036..1184275 [-], 240189184060conjugative transfer protein TraB 
28OTT_11541184375..1184479 [-], 105189184061hypothetical protein 
29OTT_11551184479..1184781 [-], 303189184062hypothetical protein 
30OTT_11561184778..1185104 [-], 327189184063conjugative transfer protein TraE  TraE_F
31OTT_11571185188..1185331 [-], 144189184064conjugative transfer protein TraE 
32OTT_11581185331..1185480 [-], 150189184065hypothetical protein 
33OTT_11591186152..1186460 [-], 309189184066integrase 
34OTT_11601188175..1188354 [+], 180189184067hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Nakayama K; Yamashita A; Kurokawa K; Morimoto T; Ogawa M; Fukuhara M; Urakami H; Ohnishi M; Uchiyama I; Ogura Y; Ooka T; Oshima K; Tamura A; Hattori M; Hayashi T (2008). The Whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution. DNA Res. 15(4):185-99. [PudMed:18508905]