SecReT4
T4SS ID566
StrainOrientia tsutsugamushi str. Ikeda
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010793
Location413970..438170
NameTra_F
FunctionNA
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111212
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number000101100
ComponentTraY_FTrbC_FOrf169_F
Number010

The information of T4SS components from NC_010793
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1OTT_0391409532..410122 [+], 591189183298hypothetical protein 
2OTT_0392410134..411795 [+], 1662189183299hypothetical protein 
3OTT_0393412409..413194 [+], 786189183300exodeoxyribonuclease III 
4OTT_0394413236..413691 [-], 456189183301conjugative transfer protein TraD 
5OTT_0395413970..415286 [+], 1317189183302conjugative transfer protein TraA  TraI_F
6OTT_0396415271..415981 [+], 711189183303conjugative transfer protein TraA  TraI_F
7OTT_0397415996..416820 [+], 825189183304conjugative transfer protein TraA 
8OTT_0398416849..418504 [-], 1656189183305ankyrin repeat-containing protein 10_01 
9OTT_0399418665..419783 [+], 1119189183306conjugative transfer protein TraI 
10OTT_0400419768..420832 [+], 1065189183307transposase 
11OTT_0401420842..422596 [-], 1755189183308conjugative transfer protein TraD  TraD_F
12OTT_0402422602..423741 [-], 1140189183309TPR repeat-containing protein 01_03 
13OTT_0403423750..426077 [-], 2328189183310conjugative transfer protein TraG  TraG_F
14OTT_0404426160..427122 [-], 963189183311transposase 
15OTT_0405427299..427634 [-], 336189183312conjugative transfer protein TraG  TraG_F
16OTT_0406427634..428935 [-], 1302189183313conjugative transfer protein TraH  TraH_F
17OTT_0407429011..429637 [-], 627189183314conjugative transfer protein TraF  TraF_F
18OTT_0408429634..430833 [-], 1200189183315conjugative transfer protein TraN  TraN_F
19OTT_0409430884..431324 [-], 441189183316conjugative transfer protein TraN 
20OTT_0410431321..431641 [-], 321189183317conjugative transfer protein TrbC  TrbC_F
21OTT_0411431726..432409 [-], 684189183318conjugative transfer protein TraU  TraU_F
22OTT_0412432777..433814 [+], 1038189183319ankyrin repeat-containing protein 05_02 
23OTT_0413433728..434882 [-], 1155189183320conjugative transfer protein TraC  TraC_F
24OTT_0414434980..435300 [-], 321189183321hypothetical protein  TraV_F
25OTT_0415435300..436628 [-], 1329189183322conjugative transfer protein TraB  TraB_F
26OTT_0416436671..437000 [-], 330189183323hypothetical protein 
27OTT_0417437145..437621 [-], 477189183324hypothetical protein 
28OTT_0418437751..438170 [-], 420189183325conjugative transfer protein TraE  TraE_F
29OTT_0419438170..438493 [-], 324189183326hypothetical protein 
30OTT_0420438829..439212 [-], 384189183327integrase 
31OTT_0421439453..439659 [-], 207189183328integrase 
32OTT_0422439613..440023 [-], 411189183329integrase 
33OTT_0423440441..440800 [-], 360189183330transposase 
34OTT_0424 (spo0J)441094..441975 [-], 882189183331Spo0J protein 
35OTT_0425 (soj)441987..442784 [-], 798189183332Soj protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Nakayama K; Yamashita A; Kurokawa K; Morimoto T; Ogawa M; Fukuhara M; Urakami H; Ohnishi M; Uchiyama I; Ogura Y; Ooka T; Oshima K; Tamura A; Hattori M; Hayashi T (2008). The Whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution. DNA Res. 15(4):185-99. [PudMed:18508905]