SecReT4
T4SS ID567
StrainOrientia tsutsugamushi str. Ikeda
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010793
Location168769..219172
NameTra_F
FunctionNA
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number022111232
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number000203100
ComponentTraY_FTrbC_FOrf169_F
Number020

The information of T4SS components from NC_010793
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1OTT_0169164258..164770 [-], 513189183076hypothetical protein 
2OTT_0170166062..166856 [-], 795189183077ComL-like lipoprotein 
3OTT_0171 (lspA)167151..167657 [+], 507189183078lipoprotein signal peptidase 
4OTT_0172168769..170226 [+], 1458189183079conjugative transfer protein TraA  TraI_F
5OTT_0173170241..171038 [+], 798189183080conjugative transfer protein TraA 
6OTT_0174171302..171772 [+], 471189183081conjugative transfer protein TraI 
7OTT_0175171801..172121 [+], 321189183082conjugative transfer protein TraI 
8OTT_0176172114..172485 [+], 372189183083conjugative transfer protein TraI 
9OTT_0177172509..173597 [-], 1089189183084conjugative transfer protein TraA 
10OTT_0178173876..174331 [+], 456189183085conjugative transfer protein TraD 
11OTT_0179174373..175158 [-], 786189183086exodeoxyribonuclease III 
12OTT_0180175772..177715 [-], 1944189183087hypothetical protein 
13OTT_0181178715..179137 [+], 423189183088transposase 
14OTT_0182179469..181364 [+], 1896189183089repeat-containing protein A_01 
15OTT_0183181490..181771 [-], 282189183090replicative DNA helicase, DnaB 
16OTT_0184181908..182132 [-], 225189183091transposase 
17OTT_0185182339..183085 [+], 747189183092transposase 
18OTT_0186183428..184003 [-], 576189183093hypothetical protein 
19OTT_0187184092..184547 [-], 456189183094conjugative transfer protein TraD 
20OTT_0188184843..184944 [+], 102189183095conjugative transfer protein TraA 
21OTT_0189185050..187659 [+], 2610189183096conjugative transfer protein TraA  TraI_F
22OTT_0190187990..189060 [+], 1071189183097conjugative transfer protein TraI 
23OTT_0191189112..189672 [+], 561189183098transposase 
24OTT_0192189688..190656 [-], 969189183099transposase 
25OTT_0193190923..191309 [+], 387189183100integrase 
26OTT_0194191374..191667 [+], 294189183101hypothetical protein 
27OTT_0195192106..192372 [+], 267189183102conjugative transfer protein TraU  TraU_F
28OTT_0196192419..192817 [+], 399189183103conjugative transfer protein TraN 
29OTT_0197192854..193039 [+], 186189183104conjugative transfer protein TraN 
30OTT_0198193050..193214 [+], 165189183105conjugative transfer protein TraF 
31OTT_0199193211..194104 [+], 894189183106conjugative transfer protein TraH  TraH_F
32OTT_0200194269..194613 [+], 345189183107conjugative transfer protein TraD 
33OTT_0201194602..195183 [-], 582189183108conjugative transfer protein TraD  TraD_F
34OTT_0202195143..195601 [-], 459189183109conjugative transfer protein TraD 
35OTT_0203195607..196806 [-], 1200189183110conjugative transfer protein TraG  TraG_F
36OTT_0204196889..197857 [-], 969189183111transposase 
37OTT_0205198028..198363 [-], 336189183112conjugative transfer protein TraG  TraG_F
38OTT_0206198363..198842 [-], 480189183113conjugative transfer protein TraH  TraH_F
39OTT_0207198772..199437 [-], 666189183114conjugative transfer protein TraH  TraH_F
40OTT_0208199519..199665 [-], 147189183115conjugative transfer protein TraH 
41OTT_0209199662..200384 [-], 723189183116conjugative transfer protein TraF  TraF_F
42OTT_0210200588..201766 [-], 1179189183117ankyrin repeat-containing protein 04_01 
43OTT_0211201923..203614 [-], 1692189183118conjugative transfer protein TraN  TraN_F
44OTT_0212203611..203931 [-], 321189183119conjugative transfer protein TrbC  TrbC_F
45OTT_0213204016..204699 [-], 684189183120conjugative transfer protein TraU  TraU_F
46OTT_0214205067..206104 [+], 1038189183121ankyrin repeat-containing protein 05_01 
47OTT_0215206018..207874 [-], 1857189183122conjugative transfer protein TraC  TraC_F
48OTT_0216207786..208115 [-], 330189183123hypothetical protein  TraV_F
49OTT_0217208115..208384 [-], 270189183124conjugative transfer protein TraB  TraB_F
50OTT_0218208347..209165 [-], 819189183125conjugative transfer protein TraB  TraB_F
51OTT_0219209484..209813 [-], 330189183126hypothetical protein 
52OTT_0220210178..210654 [-], 477189183127hypothetical protein 
53OTT_0221210651..211202 [-], 552189183128conjugative transfer protein TraE  TraE_F
54OTT_0222211202..211537 [-], 336189183129hypothetical protein 
55OTT_0223212022..212912 [-], 891189183130integrase 
56OTT_0224213349..213648 [+], 300189183131hypothetical protein 
57OTT_0225213629..215431 [+], 1803189183132conjugative transfer protein TraC  TraC_F
58OTT_0226215330..216340 [-], 1011189183133ankyrin repeat-containing protein 06_01 
59OTT_0227216495..217082 [+], 588189183134conjugative transfer protein TraU  TraU_F
60OTT_0228217167..217487 [+], 321189183135conjugative transfer protein TrbC  TrbC_F
61OTT_0229217484..218251 [+], 768189183136conjugative transfer protein TraN 
62OTT_0230218540..219172 [+], 633189183137conjugative transfer protein TraN  TraN_F
63OTT_0231219424..220932 [+], 1509189183138TPR repeat-containing protein 03 
64OTT_0232221043..221489 [+], 447189183139hypothetical protein 
65OTT_0233221766..222332 [+], 567189183140conjugative transfer protein TraF 
66OTT_0234222612..222809 [-], 198189183141transposase 
67OTT_0235223065..223721 [-], 657189183142hypothetical protein 
68OTT_0236223718..224077 [-], 360189183143ankyrin repeat-containing protein 03_02 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Nakayama K; Yamashita A; Kurokawa K; Morimoto T; Ogawa M; Fukuhara M; Urakami H; Ohnishi M; Uchiyama I; Ogura Y; Ooka T; Oshima K; Tamura A; Hattori M; Hayashi T (2008). The Whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution. DNA Res. 15(4):185-99. [PudMed:18508905]