SecReT4
T4SS ID576
StrainShewanella sp. ANA-3
Repliconplasmid 1 [Browse all T4SS(s) in this replicon]
AccessionNC_008573
Location68453..92450; 134681..155239
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number000

The information of T4SS components from NC_008573
Region 1: 68453..92450
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Shewana3_420163987..64961 [-], 975117676141ATPase 
2Shewana3_420265058..66125 [-], 1068117676142hypothetical protein 
3Shewana3_420366304..66699 [-], 396117676143hypothetical protein 
4Shewana3_420468453..70252 [-], 1800117676144UvrD/REP helicase  TraI_F
5Shewana3_420570404..71261 [+], 858117676145hypothetical protein 
6Shewana3_420671303..75577 [-], 4275117676146hypothetical protein  TraN_F
7Shewana3_420775580..76659 [-], 1080117676147TraU family protein  TraU_F
8Shewana3_420876728..78023 [-], 1296117676148hypothetical protein  TraW_F
9Shewana3_420978004..78510 [-], 507117676149Type IV secretory pathway protease TraF-like protein 
10Shewana3_421078585..79010 [+], 426117676150hypothetical protein 
11Shewana3_421179152..79604 [-], 453117676151hypothetical protein 
12Shewana3_421279601..80062 [-], 462117676152hypothetical protein 
13Shewana3_421380198..84442 [-], 4245117676153hypothetical protein 
14Shewana3_421484628..85533 [-], 906117676154hypothetical protein 
15Shewana3_421585589..87583 [-], 1995117676155helicase domain-containing protein 
16Shewana3_421687652..88143 [-], 492117676156hypothetical protein 
17Shewana3_421788272..88994 [+], 723117676157putative signal transduction protein 
18Shewana3_421889025..91709 [-], 2685117676158Type IV secretory pathway VirB4 components-like protein  TraC_F
19Shewana3_421991722..92450 [-], 729117676159hypothetical protein  TraV_F
20Shewana3_422092450..93277 [-], 828117676160hypothetical protein 
21Shewana3_422193556..94818 [+], 1263117676161hypothetical protein 
22Shewana3_422294833..95180 [+], 348117676162hypothetical protein 
23Shewana3_422395440..96366 [+], 927117676163hypothetical protein 
24Shewana3_422496487..96696 [+], 210117676164hypothetical protein 
 
Region 2: 134681..155239
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Shewana3_4254131864..133129 [-], 1266117676193phage integrase family protein 
2Shewana3_4255133553..133855 [-], 303117676194hypothetical protein 
3Shewana3_4256133865..134134 [-], 270117676195hypothetical protein 
4Shewana3_4257134135..134677 [-], 543117676196hypothetical protein 
5Shewana3_4258134681..136039 [-], 1359117676197TraB pilus assembly family protein  TraB_F
6Shewana3_4259136041..137258 [-], 1218117676198putative periplasmic protein  TraK_F
7Shewana3_4260137306..137962 [-], 657117676199hypothetical protein  TraE_F
8Shewana3_4261137972..138256 [-], 285117676200hypothetical protein  TraL_F
9Shewana3_4262138328..138615 [-], 288117676201hypothetical protein  TraA_F
10Shewana3_4263138841..139476 [-], 636117676202hypothetical protein 
11Shewana3_4264139489..141363 [-], 1875117676203hypothetical protein  TraD_F
12Shewana3_4265141356..144181 [-], 2826117676204relaxase 
13Shewana3_4266144181..144900 [-], 720117676205hypothetical protein 
14Shewana3_4267144910..145329 [-], 420117676206hypothetical protein 
15Shewana3_4268146057..147124 [+], 1068117676207hypothetical protein 
16Shewana3_4269147133..147420 [+], 288117676208hypothetical protein 
17Shewana3_4270147519..148514 [+], 996117676209hypothetical protein  TraF_F
18Shewana3_4271148511..149905 [+], 1395117676210hypothetical protein  TraH_F
19Shewana3_4272149909..155239 [+], 5331117676211hypothetical protein  TraG_F
20Shewana3_4273155350..156240 [+], 891117676212hypothetical protein 
21Shewana3_4274156254..156799 [+], 546117676213hypothetical protein 
22Shewana3_4275156887..157792 [-], 906117676214hypothetical protein 
23Shewana3_4276157936..158808 [-], 873117676215site-binding protein, DNA replication region 
24Shewana3_4277158929..159672 [+], 744117676216OmpA/MotB domain-containing protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_008573