SecReT4
T4SS ID58
StrainComamonas testosteroni CNB-1
Repliconplasmid pCNB [Browse all T4SS(s) in this replicon]
AccessionNC_010935
Location19873..31730; 85501..87938
NameTrb
FunctionConjugation
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number11111

The information of T4SS components from NC_010935
Region 1: 19873..31730
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pCNB_p22 (padR)15512..15817 [-], 306190571942PadR 
2pCNB_p23 (chrA)15828..17033 [-], 1206190571943chromate transporter 
3pCNB_p24 (trfA1)17479..18702 [-], 1224190571944TrfA1 
4pCNB_p25 (ssb)18751..19089 [-], 339190571945Ssb 
5pCNB_p26 (trbA)19181..19558 [+], 378190571946TrbA 
6pCNB_p27 (trbB)19873..20838 [+], 966190571947TrbB  TrbB
7pCNB_p28 (trbC)20868..21332 [+], 465190571948TrbC  TrbC
8pCNB_p29 (trbD)21336..21647 [+], 312190571949TrbD  TrbD
9pCNB_p30 (trbE)21644..24202 [+], 2559190571950TrbE  TrbE
10pCNB_p31 (trbF)24199..24987 [+], 789190571951TrbF  TrbF
11pCNB_p32 (trbG)24984..25898 [+], 915190571952TrbG  TrbG
12pCNB_p33 (trbH)25901..26362 [+], 462190571953TrbH  TrbH
13pCNB_p34 (trbI)26366..27745 [+], 1380190571954TrbI  TrbI
14pCNB_p35 (trbJ)27762..28535 [+], 774190571955TrbJ  TrbJ
15pCNB_p36 (trbK)28545..28766 [+], 222190571956TrbK  TrbK
16pCNB_p37 (trbL)28778..30496 [+], 1719190571957TrbL  TrbL
17pCNB_p38 (trbM)30515..31093 [+], 579190571958TrbM 
18pCNB_p39 (trbN)31095..31730 [+], 636190571959TrbN  TrbN
19pCNB_p40 (trbO)31760..32029 [+], 270190571960TrbO 
20pCNB_p41 (trbP)32026..32724 [+], 699190571961TrbP 
21pCNB_p4232740..33183 [+], 444190571962hypothetical protein 
22pCNB_p4333286..33702 [+], 417190571963major outer membrane lipoprotein 
 
Region 2: 85501..87938
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pCNB_p86 (traD)83009..83401 [-], 393190572001conjugal transfer protein TraD 
2pCNB_p87 (traE)83426..85486 [-], 2061190572002DNA topoisomerase 
3pCNB_p88 (traF)85501..86037 [-], 537190572003TraF  TraF
4pCNB_p89 (traG)86034..87938 [-], 1905190572004TraG  TraG
5pCNB_p90 (traI)87935..90193 [-], 2259190572005DNA relaxase 
6pCNB_p91 (traJ)90228..90599 [-], 372190572006conjugal transfer protein 
7pCNB_p9290604..90825 [-], 222190572007hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Ma YF; Wu JF; Wang SY; Jiang CY; Zhang Y; Qi SW; Liu L; Zhao GP; Liu SJ (2007). Nucleotide sequence of plasmid pCNB1 from comamonas strain CNB-1 reveals novel genetic organization and evolution for 4-chloronitrobenzene degradation. Appl Environ Microbiol. 73(14):4477-83. [PudMed:17526790]