SecReT4
T4SS ID582
StrainEscherichia coli plasmid pAR060302 (NC_012692)
Repliconplasmid pAR060302 [Browse all T4SS(s) in this replicon]
AccessionNC_012692
Location48097..80693; 155402..163413
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number001

The information of T4SS components from NC_012692
Region 1: 48097..80693
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pAR060302_006343183..43800 [+], 618237809970hypothetical protein 
2pAR060302_006444033..44311 [+], 279237809971hypothetical protein 
3pAR060302_006544402..44890 [-], 489237809972hypothetical protein 
4pAR060302_0066 (topB)44905..47097 [-], 2193237809973TopB 
5pAR060302_006747097..47330 [-], 234237809974hypothetical protein 
6pAR060302_006847312..47944 [-], 633237809975hypothetical protein 
7pAR060302_0069 (traI)48097..51069 [+], 2973237809976TraI  TraI_F
8pAR060302_0070 (traD)51066..52931 [+], 1866237809977TraD  TraD_F
9pAR060302_007152942..53526 [+], 585237809978hypothetical protein 
10pAR060302_007253483..54112 [+], 630237809979hypothetical protein 
11pAR060302_007354122..54568 [+], 447237809980hypothetical protein 
12pAR060302_007454578..54955 [+], 378237809981hypothetical protein 
13pAR060302_007555027..55617 [+], 591237809982hypothetical protein 
14pAR060302_007655941..56318 [+], 378237809983hypothetical protein 
15pAR060302_0077 (traL)56463..56744 [+], 282237809984TraL  TraL_F
16pAR060302_0078 (traE)56741..57367 [+], 627237809985TraE  TraE_F
17pAR060302_007957351..58268 [+], 918237809986TraK family protein  TraK_F
18pAR060302_0080 (traB)58265..59581 [+], 1317237809987TraB  TraB_F
19pAR060302_0081 (traV)59578..60156 [+], 579237809988TraV  TraV_F
20pAR060302_0082 (traA)60160..60552 [+], 393237809989TraA  TraA_F
21pAR060302_008360837..62099 [+], 1263237809990transposase InsC3 for insertion sequence ISEc9 
22pAR060302_0084 (ampC)62423..63568 [+], 1146237809991beta-lactamase 
23pAR060302_0085 (blc1)63662..64195 [+], 534237809992outer membrane lipoprotein Blc 
24pAR060302_0086 (sugE1)64192..64632 [-], 441237809993SugE1 
25pAR060302_008764766..65191 [+], 426237809994hypothetical protein 
26pAR060302_008865237..70723 [+], 5487237809995hypothetical protein 
27pAR060302_008970872..71579 [+], 708237809996hypothetical protein 
28pAR060302_0090 (traC)71576..74023 [+], 2448237809997TraC  TraC_F
29pAR060302_009174038..74355 [+], 318237809998hypothetical protein 
30pAR060302_0092 (trhF)74352..74882 [+], 531237809999TrhF 
31pAR060302_0093 (traW)74845..76110 [+], 1266237810000TraW  TraW_F
32pAR060302_009476107..76778 [+], 672237810001hypothetical protein 
33pAR060302_0095 (traU)76775..77782 [+], 1008237810002TraU  TraU_F
34pAR060302_0096 (traN)77886..80693 [+], 2808237810003conjugal transfer mating pair stabilization protein TraN  TraN_F
35pAR060302_009780732..81592 [-], 861237810004hypothetical protein 
36pAR060302_009881715..82356 [-], 642237810005hypothetical protein 
37pAR060302_009982570..82971 [+], 402237810006hypothetical protein 
38pAR060302_010083209..83460 [+], 252237810007hypothetical protein 
39pAR060302_010183680..84648 [+], 969237810008ATPase associated with various cellular activities (AAA) family protein 
40pAR060302_010284659..85567 [+], 909237810009hypothetical protein 
 
Region 2: 155402..163413
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pAR060302_0176150586..151077 [+], 492237810082hypothetical protein 
2pAR060302_0177 (ter)151404..152279 [+], 876237810083DNA replication terminus site-binding protein 
3pAR060302_0178152441..153481 [+], 1041237810084hypothetical protein 
4pAR060302_0179153768..155279 [+], 1512237810085UvrD/REP helicase family protein 
5pAR060302_0180 (traF)155402..156430 [+], 1029237810086TraF  TraF_F
6pAR060302_0181 (traH)156432..157865 [+], 1434237810087TraH  TraH_F
7pAR060302_0182 (traG)157878..161492 [+], 3615237810088TraG  TraG_F
8pAR060302_0183161530..161892 [-], 363237810089hypothetical protein 
9pAR060302_0184162608..162880 [+], 273237810090hypothetical protein 
10pAR060302_0185162880..163413 [+], 534237810091transglycosylase SLT domain containing protein  Orf169_F
11pAR060302_0186163424..164032 [+], 609237810092hypothetical protein 
12pAR060302_0187164029..164580 [+], 552237810093hypothetical protein 
13pAR060302_0188164640..165059 [-], 420237810094hypothetical protein 
14pAR060302_0189165061..165354 [-], 294237810095hypothetical protein 
15pAR060302_0190165371..166354 [-], 984237810096StbA 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Call DR; Singer RS; Meng D; Broschat SL; Orfe LH; Anderson JM; Herndon DR; Kappmeyer LS; Daniels JB; Besser TE (2010). blaCMY-2-positive IncA/C plasmids from Escherichia coli and Salmonella enterica are a distinct component of a larger lineage of plasmids. Antimicrob Agents Chemother. 54(2):590-6. [PudMed:19949054]