SecReT4
T4SS ID584
StrainProteus mirabilis HI4320
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010554
Location2653922..2661726; 2682565..2704628
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number001

The information of T4SS components from NC_010554
Region 1: 2653922..2661726
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PMI2422 (prfC)2649499..2651088 [-], 1590197286268peptide chain release factor 3 
2PMI24232651345..2651992 [-], 648197286269phage repressor 
3PMI24242652110..2652361 [+], 252197286270phage regulatory protein 
4PMI24252652417..2653286 [+], 870197286271hypothetical protein 
5PMI24262653327..2653935 [+], 609197286272hypothetical protein 
6PMI24272653922..2654470 [+], 549197286273phage transglycosylase  Orf169_F
7PMI24282654467..2654766 [+], 300197286274hypothetical protein 
8PMI24292654763..2655296 [+], 534197286275phage regulatory protein 
9PMI24302655354..2655785 [+], 432197286276phage membrane protein 
10PMI24312655818..2659387 [-], 3570197286277pilus assembly protein  TraG_F
11PMI24322659391..2660779 [-], 1389197286278pilus assembly protein  TraH_F
12PMI24332660782..2661726 [-], 945197286279pilus assembly  TraF_F
13PMI24342662014..2663906 [-], 1893197286280plasmid-related helicase 
14PMI24352663903..2665867 [-], 1965197286281plasmid-like protein 
15PMI24362666041..2666241 [-], 201197286282plasmid-like protein 
 
Region 2: 2682565..2704628
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PMI24512677804..2678406 [+], 603197286297plasmid-like protein 
2PMI24522678515..2679189 [+], 675197286298endonuclease 
3PMI24532679254..2679772 [-], 519197286299plasmid-related regulatory protein 
4PMI24542679792..2682065 [-], 2274197286300plasmid-related membrane protein 
5PMI24552682075..2682323 [-], 249197286301hypothetical protein 
6PMI24562682565..2686257 [-], 3693197286302mating pair stabilization protein  TraN_F
7PMI24572686260..2687288 [-], 1029197286303plasmid pilus assembly  TraU_F
8PMI24582687272..2688399 [-], 1128197286304plasmid pilus assembly protein  TraW_F
9PMI24592688407..2688919 [-], 513197286305plasmid conjugation signal peptidase 
10PMI24602688903..2689250 [-], 348197286306plasmid-like protein 
11PMI24612689243..2691642 [-], 2400197286307plasmid pilus assembly protein  TraC_F
12PMI24622691642..2692334 [-], 693197286308plasmid-related disulfide bond isomerase 
13PMI24632692466..2693404 [-], 939197286309plasmid-like protein 
14PMI24642693397..2694230 [-], 834197286310plasmid-like protein 
15PMI24652694408..2694794 [-], 387197286311plasmid-like protein  TraA_F
16PMI24662694791..2695441 [-], 651197286312plasmid-like protein  TraV_F
17PMI24672695438..2696727 [-], 1290197286313plasmid pilus assembly protein  TraB_F
18PMI24682696730..2697629 [-], 900197286314plasmid-like protein  TraK_F
19PMI24692697610..2698236 [-], 627197286315plasmid pilus assembly protein  TraE_F
20PMI24702698233..2698514 [-], 282197286316plasmid pilus assembly protein  TraL_F
21PMI24712698550..2698789 [+], 240197286317plasmid-like protein 
22PMI24722698803..2699390 [+], 588197286318plasmid-like protein 
23PMI24732699417..2700061 [-], 645197286319plasmid-like protein 
24PMI24742700039..2700599 [-], 561197286320plasmid-like protein 
25PMI24752700609..2702429 [-], 1821197286321plasmid conjugative transfer protein  TraD_F
26PMI24762702478..2704628 [-], 2151197286322plasmid conjugative relaxase  TraI_F
27PMI24772704877..2707012 [-], 2136197286323DNA helicase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICEPmiUSA1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Flannery EL; Antczak SM; Mobley HL (2011). Self-transmissibility of the integrative and conjugative element ICEPm1 between clinical isolates requires a functional integrase, relaxase, and type IV secretion system. J Bacteriol. 193(16):4104-12. [PudMed:21665966] experimental
(2) Pearson MM; Sebaihia M; Churcher C; Quail MA; Seshasayee AS; Luscombe NM; Abdellah Z; Arrosmith C; Atkin B; Chillingworth T; Hauser H; Jagels K; Moule S; Mungall K; Norbertczak H; Rabbinowitsch E; Walker D; Whithead S; Thomson NR; Rather PN; Parkhill J; Mobley HL (2008). Complete genome sequence of uropathogenic Proteus mirabilis, a master of both adherence and motility. J Bacteriol. 190(11):4027-37. [PudMed:18375554]
 
experimental This literature contains experimental investigation