SecReT4
T4SS ID585
StrainYersinia pestis biovar Orientalis str. IP275 plasmid pIP1202 (NC_009141)
Repliconplasmid pIP1202 [Browse all T4SS(s) in this replicon]
AccessionNC_009141
Location64226..92392; 171785..179796
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
experimental Experimental investigation has been performed on this T4SS.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number001

The information of T4SS components from NC_009141
Region 1: 64226..92392
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1YpIP275_pIP1202_008859311..59928 [+], 618134044776hypothetical protein 
2YpIP275_pIP1202_008960140..60439 [+], 300134044827hypothetical protein 
3YpIP275_pIP1202_009060531..61019 [-], 489134044803hypothetical protein 
4YpIP275_pIP1202_0091 (topB)61034..63226 [-], 2193134044830DNA topoisomerase III 
5YpIP275_pIP1202_009263441..64058 [-], 618134044902putative lipoprotein 
6YpIP275_pIP1202_0093 (traI)64226..67204 [+], 2979134044797type IV conjugative transfer system protein TraI  TraI_F
7YpIP275_pIP1202_0094 (traD)67201..69066 [+], 1866134044897type IV conjugative transfer system protein TraD  TraD_F
8YpIP275_pIP1202_009569077..69661 [+], 585134044911hypothetical protein 
9YpIP275_pIP1202_009669618..70247 [+], 630134044808putative type IV conjugative transfer system coupling factor 
10YpIP275_pIP1202_009770257..70703 [+], 447134044947hypothetical protein 
11YpIP275_pIP1202_009870713..71090 [+], 378134044846hypothetical protein 
12YpIP275_pIP1202_009971090..71752 [+], 663134044931hypothetical protein 
13YpIP275_pIP1202_010072088..72453 [+], 366134044838hypothetical protein 
14YpIP275_pIP1202_0101 (traL)72598..72879 [+], 282134044883type IV conjugative transfer system protein TraL  TraL_F
15YpIP275_pIP1202_0102 (traE)72876..73502 [+], 627134044802type IV conjugative transfer system protein TraE  TraE_F
16YpIP275_pIP1202_010373486..74403 [+], 918134044828hypothetical protein  TraK_F
17YpIP275_pIP1202_0104 (traB)74400..75716 [+], 1317134044917type IV conjugative transfer system protein TraB  TraB_F
18YpIP275_pIP1202_0105 (traV)75713..76291 [+], 579134044796type IV conjugative transfer system protein TraV  TraV_F
19YpIP275_pIP1202_0106 (traA)76304..76687 [+], 384134044863type IV conjugative transfer system protein TraA  TraA_F
20YpIP275_pIP1202_010776888..82419 [+], 5532134044789hypothetical protein 
21YpIP275_pIP1202_010882568..83275 [+], 708134044873hypothetical protein 
22YpIP275_pIP1202_0109 (traC)83272..85719 [+], 2448134044850type IV conjugative transfer system protein TraC  TraC_F
23YpIP275_pIP1202_011085734..86051 [+], 318134044762hypothetical protein 
24YpIP275_pIP1202_011186048..86578 [+], 531134044950type IV conjugative transfer system signal peptidase 
25YpIP275_pIP1202_0112 (traW)86541..87806 [+], 1266134044768type IV conjugative transfer system protein TraW  TraW_F
26YpIP275_pIP1202_011387803..88474 [+], 672134044898cyclic diguanylate phosphodiesterase domain-containing protein 
27YpIP275_pIP1202_0114 (traU)88471..89478 [+], 1008134044901type IV conjugative transfer system protein TraU  TraU_F
28YpIP275_pIP1202_0115 (traN)89594..92392 [+], 2799134044766conjugal transfer mating pair stabilization protein TraN  TraN_F
29YpIP275_pIP1202_011692431..93291 [-], 861134044847putative lipoprotein 
30YpIP275_pIP1202_011793414..94055 [-], 642134044771hypothetical protein 
31YpIP275_pIP1202_011894349..94669 [+], 321134044868hypothetical protein 
32YpIP275_pIP1202_011994973..95158 [+], 186134044761hypothetical protein 
33YpIP275_pIP1202_012095378..96346 [+], 969134044874AAA family ATPase 
34YpIP275_pIP1202_012196357..97265 [+], 909134044930hypothetical protein 
 
Region 2: 171785..179796
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1YpIP275_pIP1202_0206166969..167460 [+], 492134044752hypothetical protein 
2YpIP275_pIP1202_0207167787..168662 [+], 876134044932DNA replication terminus site-binding protein 
3YpIP275_pIP1202_0208168824..169864 [+], 1041134044867hypothetical protein 
4YpIP275_pIP1202_0209169864..170142 [+], 279134044933hypothetical protein 
5YpIP275_pIP1202_0210170151..171662 [+], 1512134044744hypothetical protein 
6YpIP275_pIP1202_0211 (traF)171785..172813 [+], 1029134044800type IV conjugative transfer system protein TraF  TraF_F
7YpIP275_pIP1202_0212 (traH)172815..174248 [+], 1434134044926type IV conjugative transfer system protein TraH  TraH_F
8YpIP275_pIP1202_0213 (traG)174261..177875 [+], 3615134044751type IV conjugative transfer system protein TraG  TraG_F
9YpIP275_pIP1202_0214177913..178275 [-], 363134044820hypothetical protein 
10YpIP275_pIP1202_0215178991..179263 [+], 273134044753Ner-like DNA-binding protein 
11YpIP275_pIP1202_0216179263..179796 [+], 534134044806transglycosylase SLT domain-containing protein  Orf169_F
12YpIP275_pIP1202_0217179807..180415 [+], 609134044791hypothetical protein 
13YpIP275_pIP1202_0218180463..180963 [+], 501134044833hypothetical protein 
14YpIP275_pIP1202_0219181023..181442 [-], 420134044770hypothetical protein 
15YpIP275_pIP1202_0220181444..181737 [-], 294134044903hypothetical protein 
16YpIP275_pIP1202_0221181754..182737 [-], 984134044826hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Welch TJ; Fricke WF; McDermott PF; White DG; Rosso ML; Rasko DA; Mammel MK; Eppinger M; Rosovitz MJ; Wagner D; Rahalison L; Leclerc JE; Hinshaw JM; Lindler LE; Cebula TA; Carniel E; Ravel J (2007). Multiple antimicrobial resistance in plague: an emerging public health risk. PLoS One. 2(3):e309. [PudMed:17375195]