SecReT4
T4SS ID586
StrainSalmonella enterica subsp. enterica serovar Newport str. SL254
Repliconplasmid pSN254 [Browse all T4SS(s) in this replicon]
AccessionNC_009140
Location46409..58864; 81520..90637; 165346..173357
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
experimental Experimental investigation has been performed on this T4SS.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number001

The information of T4SS components from NC_009140
Region 1: 46409..58864
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SNSL254_pSN254_006041495..42112 [+], 618134047238hypothetical protein 
2SNSL254_pSN254_006142345..42623 [+], 279134047270hypothetical protein 
3SNSL254_pSN254_006242714..43202 [-], 489134047174hypothetical protein 
4SNSL254_pSN254_0063 (topB)43217..45409 [-], 2193134047127DNA topoisomerase III 
5SNSL254_pSN254_006445624..46241 [-], 618134047182lipoprotein 
6SNSL254_pSN254_0065 (traI)46409..49381 [+], 2973134047158type IV conjugative transfer system protein TraI  TraI_F
7SNSL254_pSN254_0066 (traD)49378..51243 [+], 1866134047236type IV conjugative transfer system protein TraD  TraD_F
8SNSL254_pSN254_006751254..51838 [+], 585134047096hypothetical protein 
9SNSL254_pSN254_006851795..52424 [+], 630134047224type IV conjugative transfer system coupling factor 
10SNSL254_pSN254_006952434..52880 [+], 447134047258hypothetical protein 
11SNSL254_pSN254_007052890..53267 [+], 378134047170hypothetical protein 
12SNSL254_pSN254_007153339..53929 [+], 591134047099hypothetical protein 
13SNSL254_pSN254_007254265..54630 [+], 366134047242hypothetical protein 
14SNSL254_pSN254_0073 (traL)54775..55056 [+], 282134047157type IV conjugative transfer system protein TraL  TraL_F
15SNSL254_pSN254_0074 (traE)55053..55679 [+], 627134047205type IV conjugative transfer system protein TraE  TraE_F
16SNSL254_pSN254_007555663..56580 [+], 918134047107hypothetical protein  TraK_F
17SNSL254_pSN254_0076 (traB)56577..57893 [+], 1317134047150type IV conjugative transfer system protein TraB  TraB_F
18SNSL254_pSN254_0077 (traV)57890..58468 [+], 579134047241type IV conjugative transfer system protein TraV  TraV_F
19SNSL254_pSN254_0078 (traA)58481..58864 [+], 384134047118type IV conjugative transfer system protein TraA  TraA_F
20SNSL254_pSN254_008160806..61513 [-], 708134047123hypothetical protein 
 
Region 2: 81520..90637
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SNSL254_pSN254_009480816..81523 [+], 708134047146hypothetical protein 
2SNSL254_pSN254_0095 (traC)81520..83967 [+], 2448134047203type IV conjugative transfer system protein TraC  TraC_F
3SNSL254_pSN254_009683982..84299 [+], 318134047176hypothetical protein 
4SNSL254_pSN254_009784296..84826 [+], 531134047165type IV conjugative transfer system signal peptidase 
5SNSL254_pSN254_0098 (traW)84789..86054 [+], 1266134047266type IV conjugative transfer system protein TraW  TraW_F
6SNSL254_pSN254_009986051..86722 [+], 672134047159cyclic diguanylate phosphodiesterase domain-containing protein 
7SNSL254_pSN254_0100 (traU)86719..87726 [+], 1008134047249type IV conjugative transfer system protein TraU  TraU_F
8SNSL254_pSN254_0101 (traN)87842..90637 [+], 2796134047133conjugal transfer mating pair stabilization protein TraN  TraN_F
9SNSL254_pSN254_010290676..91536 [-], 861134047164lipoprotein 
10SNSL254_pSN254_010391659..92300 [-], 642134047093hypothetical protein 
11SNSL254_pSN254_010492595..92915 [+], 321134047273hypothetical protein 
12SNSL254_pSN254_010593219..93404 [+], 186134047084hypothetical protein 
13SNSL254_pSN254_010693624..94592 [+], 969134047151AAA family ATPase 
14SNSL254_pSN254_010794603..95511 [+], 909134047175hypothetical protein 
 
Region 3: 165346..173357
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SNSL254_pSN254_0182160530..161021 [+], 492134047233hypothetical protein 
2SNSL254_pSN254_0183161348..162223 [+], 876134047095DNA replication terminus site-binding protein 
3SNSL254_pSN254_0184162385..163425 [+], 1041134047219hypothetical protein 
4SNSL254_pSN254_0185163425..163703 [+], 279134047187hypothetical protein 
5SNSL254_pSN254_0186163712..165223 [+], 1512134047111hypothetical protein 
6SNSL254_pSN254_0187 (traF)165346..166374 [+], 1029134047253type IV conjugative transfer system protein TraF  TraF_F
7SNSL254_pSN254_0188 (traH)166376..167809 [+], 1434134047117type IV conjugative transfer system protein TraH  TraH_F
8SNSL254_pSN254_0189 (traG)167822..171436 [+], 3615134047246type IV conjugative transfer system protein TraG  TraG_F
9SNSL254_pSN254_0190171474..171836 [-], 363134047240hypothetical protein 
10SNSL254_pSN254_0191172552..172824 [+], 273134047185hypothetical protein 
11SNSL254_pSN254_0192172824..173357 [+], 534134047211transglycosylase  Orf169_F
12SNSL254_pSN254_0193173368..173976 [+], 609134047245hypothetical protein 
13SNSL254_pSN254_0194173973..174257 [+], 285134047181hypothetical protein 
14SNSL254_pSN254_0196174583..175002 [-], 420134047120hypothetical protein 
15SNSL254_pSN254_0197175004..175297 [-], 294134047222hypothetical protein 
16SNSL254_pSN254_0198175314..176297 [-], 984134047108hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Welch TJ; Fricke WF; McDermott PF; White DG; Rosso ML; Rasko DA; Mammel MK; Eppinger M; Rosovitz MJ; Wagner D; Rahalison L; Leclerc JE; Hinshaw JM; Lindler LE; Cebula TA; Carniel E; Ravel J (2007). Multiple antimicrobial resistance in plague: an emerging public health risk. PLoS One. 2(3):e309. [PudMed:17375195]