SecReT4
T4SS ID59
StrainXylella fastidiosa M23
Repliconplasmid pXFAS01 [Browse all T4SS(s) in this replicon]
AccessionNC_010579
Location3..38297
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number01111

The information of T4SS components from NC_010579
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1XfasM23_22273..323 [+], 321182682735conjugal transfer protein TrbD  TrbD
2XfasM23_2228311..2875 [+], 2565182682736conjugal transfer protein TrbE  TrbE
3XfasM23_22292872..3588 [+], 717182682737conjugal transfer protein TrbF  TrbF
4XfasM23_22303605..4495 [+], 891182682738conjugal transfer protein TrbG  TrbG
5XfasM23_22314498..4974 [+], 477182682739conjugal transfer protein TrbH  TrbH
6XfasM23_22324980..6380 [+], 1401182682740conjugal transfer protein TrbI  TrbI
7XfasM23_22336399..7172 [+], 774182682741conjugal transfer protein TrbJ  TrbJ
8XfasM23_22347189..7425 [+], 237182682742hypothetical protein 
9XfasM23_22357447..8817 [+], 1371182682743P-type conjugative transfer protein TrbL  TrbL
10XfasM23_22368823..9422 [+], 600182682744conjugal transfer protein TrbN  TrbN
11XfasM23_223710035..10262 [-], 228182682745hypothetical protein 
12XfasM23_223810259..10627 [-], 369182682746hypothetical protein 
13XfasM23_223911170..11733 [+], 564182682747resolvase domain-containing protein 
14XfasM23_224012064..12657 [+], 594182682748hypothetical protein 
15XfasM23_224112725..13039 [+], 315182682749hypothetical protein 
16XfasM23_224213216..13809 [+], 594182682750hypothetical protein 
17XfasM23_224313850..14437 [-], 588182682751hypothetical protein 
18XfasM23_224414505..18992 [-], 4488182682752hypothetical protein 
19XfasM23_224518998..19360 [-], 363182682753conjugal transfer protein 
20XfasM23_224619363..21420 [-], 2058182682754DNA topoisomerase III 
21XfasM23_224721449..21985 [-], 537182682755conjugal transfer peptidase TraF  TraF
22XfasM23_224821982..23916 [-], 1935182682756conjugal transfer coupling protein TraG  TraG
23XfasM23_224923913..26405 [-], 2493182682757conjugal transfer relaxase TraI 
24XfasM23_225026440..26793 [-], 354182682758conjugal transfer relaxosome component TraJ 
25XfasM23_225127018..27413 [+], 396182682759hypothetical protein 
26XfasM23_225227413..28138 [+], 726182682760conjugal transfer protein TraL 
27XfasM23_225328138..28590 [+], 453182682761conjugal transfer protein TraM 
28XfasM23_225428652..29248 [-], 597182682762hypothetical protein 
29XfasM23_225529275..29628 [-], 354182682763putative conjugation protein TraO 
30XfasM23_225629726..30757 [-], 1032182682764parB-like partition protein 
31XfasM23_225730754..31833 [-], 1080182682765cobyrinic acid ac-diamide synthase 
32XfasM23_225832062..32286 [+], 225182682766resolvase domain-containing protein 
33XfasM23_225932280..33476 [+], 1197182682767IS605 family transposase OrfB 
34XfasM23_226033517..33837 [-], 321182682768hypothetical protein 
35XfasM23_226134560..35471 [-], 912182682769plasmid encoded RepA protein 
36XfasM23_226235493..35849 [-], 357182682770hypothetical protein 
37XfasM23_226335893..36252 [-], 360182682771single-strand binding protein 
38XfasM23_226436370..36726 [+], 357182682772conjugal transfer protein TrbA 
39XfasM23_226536930..37892 [+], 963182682773conjugal transfer ATPase TrbB  TrbB
40XfasM23_226637905..38297 [+], 393182682774conjugal transfer protein TrbC  TrbC
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_010579