SecReT4
T4SS ID592
StrainProteus vulgaris plasmid Rts1 (NC_003905)
Repliconplasmid Rts1 [Browse all T4SS(s) in this replicon]
AccessionNC_003905
Location137437..158579; 174795..186259
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number001

The information of T4SS components from NC_003905
Region 1: 137437..158579
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ST585_p159 (orf191)132842..134074 [+], 123321233853hypothetical protein 
2ST585_p158 (orf192)134131..134796 [+], 66621233854hypothetical protein 
3ST585_p157 (orf193)134829..136304 [-], 147621233855helicase 
4ST585_p156 (orf194)136642..137022 [+], 38121233856hypothetical protein 
5ST585_p155 (orf195)137071..137370 [+], 30021233857hypothetical protein 
6ST585_p154 (orf196)137437..137775 [-], 33921233858putative innermembrane protein  TraA_F
7ST585_p153 (orf197)138078..138743 [+], 66621233859EDTA-resistant nuclease 
8ST585_p152 (orf198)138797..139198 [-], 40221233860outer surface protein 
9ST585_p151 (orf199)139221..140129 [-], 90921233861hypothetical membrane protein 
10ST585_p148 (orf200)140158..140739 [-], 58221233862hypothetical protein 
11ST585_p147 (orf201)140885..143563 [+], 267921233863DNA helicase  TraI_F
12ST585_p146 (orf202)143556..145523 [+], 196821233864DNA transfer  TraD_F
13ST585_p145 (orf203)145536..145913 [+], 37821233865hypothetical protein 
14ST585_p144 (orf204)145906..146565 [+], 66021233866hypothetical protein 
15ST585_p143 (orf205)146678..146968 [+], 29121233867hypothetical protein 
16ST585_p142 (orf206)146969..147814 [+], 84621233868hypothetical protein 
17ST585_p141 (orf207)147871..148155 [+], 28521233869pilus biogenesis protein  TraL_F
18ST585_p140 (orf208)148152..148769 [+], 61821233870pilus biogenesis protein  TraE_F
19ST585_p139 (orf209)148769..149935 [+], 116721233871hypothetical protein  TraK_F
20ST585_p137 (orf210)149932..151290 [+], 135921233872pilus biogenesis protein  TraB_F
21ST585_p136 (orf211)151287..151877 [+], 59121233873pilus biogenesis protein  TraV_F
22ST585_p135 (orf212)152192..152938 [+], 74721233874disulfide bond isomerase 
23ST585_p134 (orf213)152959..155445 [+], 248721233875pilus biogenesis protein  TraC_F
24ST585_p133 (orf214)155442..155717 [+], 27621233876hypothetical protein 
25ST585_p132 (orf215)155807..156259 [+], 45321233877signal peptidase 
26ST585_p131 (orf216)156253..157503 [+], 125121233878pilus biogenesis protein  TraW_F
27ST585_p130 (orf217)157503..158579 [+], 107721233879pilus biogenesis protein  TraU_F
28ST585_p129 (orf218)158710..159525 [-], 81621233880hypothetical protein 
29ST585_p128 (orf219)159816..159977 [+], 16221233881hypothetical protein 
30ST585_p126 (orf220)160090..160767 [+], 67821233882nickase 
31ST585_p125 (orf221)161303..161836 [+], 53421233883hypothetical protein 
32ST585_p124 (orf222)161889..162716 [+], 82821233884single-strand DNA binding protein 
 
Region 2: 174795..186259
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ST585_p114 (orf231)170112..171017 [+], 90621233893transposase 
2ST585_p113 (orf232)171029..171301 [+], 27321233894hypothetical protein 
3ST585_p112 (orf233)171379..172191 [+], 81321233895hypothetical protein 
4ST585_p111 (orf234)172239..172718 [+], 48021233896hypothetical protein 
5ST585_p110 (orf235)172895..173275 [+], 38121233897hypothetical protein 
6ST585_p109 (orf236)173294..173524 [+], 23121233898hypothetical protein 
7ST585_p108 (orf237)173560..173943 [+], 38421233899hypothetical protein 
8ST585_p107 (orf238)174024..174203 [+], 18021233900hypothetical protein 
9ST585_p106 (orf239)174479..174805 [+], 32721233901hypothetical protein 
10ST585_p104 (orf240)174795..175886 [+], 109221233902pilus biogenesis protein  TraF_F
11ST585_p103 (orf241)175900..177351 [+], 145221233903pilus biogenesis protein  TraH_F
12ST585_p102 (orf242)177361..180657 [+], 329721233904pilus biogenesis and aggregate stabilisation protein  TraG_F
13ST585_p101 (orf243)180672..180827 [+], 15621233905hypothetical protein 
14ST585_p100 (orf244)181127..183829 [+], 270321233906aggregate stabilisation protein  TraN_F
15ST585_p099 (orf245)183884..184663 [-], 78021233907hypothetical protein 
16ST585_p098 (orf246)184694..185185 [-], 49221233908transcriptional activator 
17ST585_p097 (orf247)185182..185706 [-], 52521233909hypothetical protein 
18ST585_p096 (orf248)185699..186259 [-], 56121233910hypothetical protein  Orf169_F
19ST585_p095 (orf249)186278..186859 [-], 58221233911merozoite surface protein 2 
20ST585_p093 (orf250)186878..187957 [-], 108021233912rod shape determination protein 
21ST585_p092 (orf251)188286..188534 [+], 24921233913hypothetical protein 
22ST585_p091 (orf252)188766..189221 [+], 45621233914hypothetical protein 
23ST585_p090 (orf253)189278..189766 [+], 48921233915hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Murata T; Ohnishi M; Ara T; Kaneko J; Han CG; Li YF; Takashima K; Nojima H; Nakayama K; Kaji A; Kamio Y; Miki T; Mori H; Ohtsubo E; Terawaki Y; Hayashi T (2002). Complete nucleotide sequence of plasmid Rts1: implications for evolution of large plasmid genomes. J Bacteriol. 184(12):3194-202. [PudMed:12029035]