SecReT4
T4SS ID594
StrainMethylibium petroleiphilum PM1
Repliconplasmid RPME01 [Browse all T4SS(s) in this replicon]
AccessionNC_008826
Location300274..335666
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111110
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number001

The information of T4SS components from NC_008826
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Mpe_B0344297668..297952 [+], 285124262884hypothetical protein 
2Mpe_B0345298247..299167 [-], 921124262885zinc metalloproteinase Mpr protein 
3Mpe_B0346299221..300066 [+], 846124262886disulfide isomerase 
4Mpe_B0347300045..300302 [+], 258124262887hypothetical protein 
5Mpe_B0348 (traW)300274..300966 [+], 693124262888sex pilus assembly protein  TraW_F
6Mpe_B0349 (traU)300963..302024 [+], 1062124262889conjugal DNA transfer protein  TraU_F
7Mpe_B0350 (trbC)302077..302763 [+], 687124262890sex pilus assembly and mating pair formation protein 
8Mpe_B0351 (ssb)302967..303476 [-], 510124262891single-stranded DNA-binding protein 
9Mpe_B0352303701..304126 [+], 426124262892hypothetical protein 
10Mpe_B0353304366..304725 [+], 360124262893hypothetical protein 
11Mpe_B0354304728..304961 [-], 234124262894hypothetical protein 
12Mpe_B0355305033..305611 [-], 579124262895hypothetical protein 
13Mpe_B0356305604..306383 [-], 780124262896hypothetical protein 
14Mpe_B0357 (dnaB)306380..307777 [-], 1398124262897replicative DNA helicase 
15Mpe_B0358 (dnaG)308885..310153 [+], 1269124262898DNA primase 
16Mpe_B0359310447..310896 [-], 450124262899hypothetical protein 
17Mpe_B0360310896..311447 [-], 552124262900hypothetical protein 
18Mpe_B0361 (traG)311837..313606 [-], 1770124262901sex pilus assembly and mating pair formation  TraD_F
19Mpe_B0362313677..314489 [-], 813124262902hypothetical protein 
20Mpe_B0363 (omp)314674..315327 [+], 654124262903outer membrane protein 
21Mpe_B0364315324..315608 [+], 285124262904pilus assembly protein  TraL_F
22Mpe_B0365 (traE)315663..316304 [+], 642124262905sex pilus assembly protein  TraE_F
23Mpe_B0366 (traK)316301..317218 [+], 918124262906sex pilus assembly protein  TraK_F
24Mpe_B0367 (traB)317220..318428 [+], 1209124262907sex pilus assembly protein  TraB_F
25Mpe_B0368318442..318927 [+], 486124262908hypothetical protein 
26Mpe_B0369 (traV)318917..319609 [+], 693124262909sex pilus assembly protein  TraV_F
27Mpe_B0370319626..319937 [+], 312124262910hypothetical protein  TraA_F
28Mpe_B0371 (traC)320102..322531 [+], 2430124262911F-pilin subunit assembly into extended F pili  TraC_F
29Mpe_B0372322685..323083 [+], 399124262912hypothetical protein 
30Mpe_B0373323080..323640 [+], 561124262913putative pilus assembly protein, TrhF 
31Mpe_B0374 (traF)323651..324604 [+], 954124262914sex pilus assembly protein  TraF_F
32Mpe_B0375 (traH)324628..326073 [+], 1446124262915sex pilus assembly protein  TraH_F
33Mpe_B0376326090..329608 [+], 3519124262916hypothetical protein  TraG_F
34Mpe_B0377 (dsbA)329959..330495 [-], 537124262917Thiol:disulfide interchange protein 
35Mpe_B0378 (gspE)330461..332212 [-], 1752124262918pili biogenesis ATPase 
36Mpe_B0379 (iagB)332481..332921 [-], 441124262919invasion protein  Orf169_F
37Mpe_B0380332946..333905 [+], 960124262920hypothetical protein 
38Mpe_B0381 (traN)333972..335666 [-], 1695124262921conjugal transfer mating pair stabilization protein TraN  TraN_F
39Mpe_B0382335672..337102 [-], 1431124262922hypothetical protein 
40Mpe_B0383337099..337509 [-], 411124262923hypothetical protein 
41Mpe_B0384337718..338038 [+], 321124262924hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Kane SR; Chakicherla AY; Chain PS; Schmidt R; Shin MW; Legler TC; Scow KM; Larimer FW; Lucas SM; Richardson PM; Hristova KR (2007). Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1. J Bacteriol. 189(5):1931-45. [PudMed:17158667]