SecReT4
T4SS ID596
StrainAcidithiobacillus ferrivorans SS3
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_015942
Location2915918..2934238; 2967379..2985775
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111110
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number001

The information of T4SS components from NC_015942
Region 1: 2915918..2934238
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Acife_29612911033..2911458 [-], 426344201035hypothetical protein 
2Acife_29622911455..2912072 [-], 618344201036hypothetical protein 
3Acife_29632912111..2912761 [-], 651344201037hypothetical protein 
4Acife_29642912767..2913222 [-], 456344201038hypothetical protein 
5Acife_29652913236..2913457 [-], 222344201039hypothetical protein 
6Acife_29662913478..2914128 [-], 651344201040hypothetical protein 
7Acife_29672914259..2914672 [-], 414344201041PilT protein domain-containing protein 
8Acife_29682914669..2914899 [-], 231344201042virulence-associated protein 
9Acife_29692915033..2915539 [-], 507344201043GCN5-like N-acetyltransferase 
10Acife_29702915536..2915814 [-], 279344201044hypothetical protein 
11Acife_29712915918..2919280 [-], 3363344201045TraG domain-containing protein  TraG_F
12Acife_29722919305..2920924 [-], 1620344201046TraH family protein  TraH_F
13Acife_29732920935..2921900 [-], 966344201047pilus assembly protein TraF  TraF_F
14Acife_29742921897..2922409 [-], 513344201048lytic transglycosylase  Orf169_F
15Acife_29752922529..2922651 [+], 123344201049hypothetical protein 
16Acife_29762922638..2922904 [+], 267344201050hypothetical protein 
17Acife_29772922909..2923046 [+], 138344201051hypothetical protein 
18Acife_29782923055..2923228 [+], 174344201052hypothetical protein 
19Acife_29792923267..2924187 [-], 921344201053hypothetical protein 
20Acife_29802924187..2926601 [-], 2415344201054metal-dependent phosphohydrolase HD region 
21Acife_29812926841..2928178 [+], 1338344201055transposase IS4 family protein 
22Acife_29822928182..2929090 [+], 909344201056hypothetical protein 
23Acife_29832929138..2929482 [-], 345344201057hypothetical protein 
24Acife_29842929494..2930273 [-], 780344201058hypothetical protein 
25Acife_29852930422..2931837 [-], 1416344201059HNH endonuclease 
26Acife_29862932129..2932416 [-], 288344201060hypothetical protein 
27Acife_29872932409..2934238 [-], 1830344201061lipoprotein  TraD_F
28Acife_29882934318..2934728 [-], 411344201062single-strand binding protein 
29Acife_29892934955..2935905 [-], 951344201063hypothetical protein 
30Acife_29902935899..2937263 [-], 1365344201064DNA topoisomerase type IA central domain-containing protein 
31Acife_29912937393..2937848 [+], 456344201065hypothetical protein 
32Acife_29922938021..2938284 [+], 264344201066hypothetical protein 
 
Region 2: 2967379..2985775
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Acife_30302962796..2963353 [-], 558344201103hypothetical protein 
2Acife_30312963353..2964603 [-], 1251344201104conserved domain-containing protein 
3Acife_30322964603..2965610 [-], 1008344201105hypothetical protein 
4Acife_30332965621..2966679 [-], 1059344201106hypothetical protein 
5Acife_30342966716..2967057 [-], 342344201107transcriptional modulator of MazE/toxin, MazF 
6Acife_30352967057..2967296 [-], 240344201108transcriptional regulator/antitoxin, MazE 
7Acife_30362967379..2970438 [-], 3060344201109conjugal transfer protein TraN  TraN_F
8Acife_30372970442..2971701 [-], 1260344201110TraU family protein  TraU_F
9Acife_30382971703..2972968 [-], 1266344201111type-F conjugative transfer system pilin assembly protein TrbC  TraW_F
10Acife_30392972965..2973765 [-], 801344201112hypothetical protein 
11Acife_30402973779..2974840 [-], 1062344201113hypothetical protein 
12Acife_30412974854..2975378 [-], 525344201114peptidase S26 
13Acife_30422975371..2975901 [-], 531344201115hypothetical protein 
14Acife_30432975898..2978492 [-], 2595344201116type-IV secretion system protein TraC  TraC_F
15Acife_30442978489..2979175 [-], 687344201117DsbA family thiol:disulfide interchange protein 
16Acife_30452979172..2980374 [-], 1203344201118type II secretion system protein E 
17Acife_30462980374..2981201 [-], 828344201119thiol:disulfide interchange domain-containing protein 
18Acife_30472981201..2981605 [-], 405344201120conjugal transfer protein TraA  TraA_F
19Acife_30482981649..2982179 [-], 531344201121type IV conjugative transfer system protein TraV  TraV_F
20Acife_30492982176..2983735 [-], 1560344201122conjugal transfer protein  TraB_F
21Acife_30502983729..2984895 [-], 1167344201123TraK lipoprotein  TraK_F
22Acife_30512984892..2985500 [-], 609344201124type IV conjugative transfer system protein TraE  TraE_F
23Acife_30522985497..2985775 [-], 279344201125type IV conjugative transfer system protein TraL  TraL_F
24Acife_30532985763..2986530 [-], 768344201126hypothetical protein 
25Acife_30542986592..2987962 [-], 1371344201127HNH endonuclease 
26Acife_30552988249..2988557 [-], 309344201128hypothetical protein 
27Acife_30562988560..2989708 [-], 1149344201129hypothetical protein 
28Acife_30572989701..2989952 [-], 252344201130hypothetical protein 
29Acife_30582989942..2990292 [-], 351344201131hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_015942