SecReT4
T4SS ID601
StrainGeobacter lovleyi SZ
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010814
Location227290..233660; 283987..297466
NameTra_F
FunctionNA
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111010
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number010101110
ComponentTraY_FTrbC_FOrf169_F
Number001

The information of T4SS components from NC_010814
Region 1: 227290..233660
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Glov_0245224203..224463 [+], 261189423317hypothetical protein 
2Glov_0246224561..226081 [-], 1521189423318ABC transporter 
3Glov_0247226478..227179 [-], 702189423319LexA DNA-binding domain-containing protein 
4Glov_0248227290..227796 [+], 507189423320lytic transglycosylase  Orf169_F
5Glov_0249227783..228493 [+], 711189423321hypothetical protein 
6Glov_0250228468..229841 [+], 1374189423322TraG family protein  TraD_F
7Glov_0251229838..231304 [+], 1467189423323metal-dependent phosphohydrolase HD sub domain-containing protein 
8Glov_0252231301..232137 [+], 837189423324glutaredoxin  TraF_F
9Glov_0253232134..233660 [+], 1527189423325hypothetical protein  TraH_F
10Glov_0254233682..234083 [+], 402189423326hypothetical protein 
11Glov_0255234602..235021 [+], 420189423327single-strand binding protein 
12Glov_0256235131..236087 [+], 957189423328hypothetical protein 
13Glov_0257236212..236376 [+], 165189423329hypothetical protein 
14Glov_0258236389..237363 [+], 975189423330hypothetical protein 
15Glov_0259237448..237648 [+], 201189423331hypothetical protein 
16Glov_0260237645..237914 [+], 270189423332hypothetical protein 
17Glov_0261238014..238427 [+], 414189423333hypothetical protein 
 
Region 2: 283987..297466
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Glov_0306281126..281866 [-], 741189423377hypothetical protein 
2Glov_0307281875..282126 [-], 252189423378hypothetical protein 
3Glov_0308282137..282631 [-], 495189423379type IV secretory protease 
4Glov_0309282609..283001 [-], 393189423380hypothetical protein 
5Glov_0310283025..283987 [-], 963189423381type-F conjugative transfer system pilin assembly protein TrbC 
6Glov_0311283987..285009 [-], 1023189423382TraU family protein  TraU_F
7Glov_0312284993..285463 [-], 471189423383hypothetical protein 
8Glov_0313285460..286116 [-], 657189423384hypothetical protein  TraW_F
9Glov_0314286113..289487 [-], 3375189423385hypothetical protein  TraN_F
10Glov_0315289493..291496 [-], 2004189423386hypothetical protein 
11Glov_0316291453..293900 [-], 2448189423387sex pilus assembly protein  TraC_F
12Glov_0317293903..294397 [-], 495189423388hypothetical protein  TraV_F
13Glov_0318294394..295662 [-], 1269189423389TraB pilus assembly family protein  TraB_F
14Glov_0319295652..296599 [-], 948189423390hypothetical protein 
15Glov_0320296599..297177 [-], 579189423391pilus assembly protein  TraE_F
16Glov_0321297200..297466 [-], 267189423392hypothetical protein  TraL_F
17Glov_0322297526..297825 [-], 300189423393hypothetical protein 
18Glov_0323297880..298632 [-], 753189423394protein-disulfide isomerase 
19Glov_0324298629..299234 [-], 606189423395OmpA/MotB domain-containing protein 
20Glov_0325299514..300806 [-], 1293189423396HipA domain-containing protein 
21Glov_0326300796..301134 [-], 339189423397XRE family transcriptional regulator 
22Glov_0327301277..301594 [-], 318189423398hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Wagner DD; Hug LA; Hatt JK; Spitzmiller MR; Padilla-Crespo E; Ritalahti KM; Edwards EA; Konstantinidis KT; Loffler FE (2012). Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae. BMC Genomics. 13(1):200. [PudMed:22616984]