SecReT4
T4SS ID602
StrainDenitrovibrio acetiphilus DSM 12809
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_013943
Location564166..578209; 603634..613175
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111010
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number010101100
ComponentTraY_FTrbC_FOrf169_F
Number000

The information of T4SS components from NC_013943
Region 1: 564166..578209
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Dacet_0545559438..559674 [+], 237291286483hypothetical protein 
2Dacet_0546559674..559883 [+], 210291286484XRE family transcriptional regulator 
3Dacet_0547559933..560877 [+], 945291286485hypothetical protein 
4Dacet_0548560866..562083 [-], 1218291286486transposase mutator type 
5Dacet_0549562179..562505 [-], 327291286487hypothetical protein 
6Dacet_0550562507..563718 [-], 1212291286488hypothetical protein 
7Dacet_0551563867..564166 [+], 300291286489hypothetical protein 
8Dacet_0552564166..564435 [+], 270291286490type IV conjugative transfer system protein TraL  TraL_F
9Dacet_0553564438..564995 [+], 558291286491hypothetical protein  TraE_F
10Dacet_0554564992..565705 [+], 714291286492hypothetical protein 
11Dacet_0555565702..566877 [+], 1176291286493TraB pilus assembly family protein  TraB_F
12Dacet_0556566856..567263 [+], 408291286494Type IV conjugative transfer system protein TraV  TraV_F
13Dacet_0557567260..570034 [+], 2775291286495sex pilus assembly protein  TraC_F
14Dacet_0558570049..570333 [+], 285291286496hypothetical protein 
15Dacet_0559570333..570983 [+], 651291286497putative cytoplasmic protein 
16Dacet_0560570940..571941 [+], 1002291286498TraU family protein  TraU_F
17Dacet_0561571911..572645 [+], 735291286499glutaredoxin  TraF_F
18Dacet_0562572727..572942 [+], 216291286500hypothetical protein 
19Dacet_0563572939..573139 [-], 201291286501hypothetical protein 
20Dacet_0564573117..576848 [-], 3732291286502hypothetical protein 
21Dacet_0565576848..578209 [-], 1362291286503TraH family protein  TraH_F
22Dacet_0567578467..579513 [+], 1047291286504hypothetical protein 
23Dacet_0568579563..580153 [+], 591291286505hypothetical protein 
24Dacet_0569580189..580713 [-], 525291286506Exonuclease RNase T and DNA polymerase III 
25Dacet_0570580736..581656 [-], 921291286507transcriptional regulator protein-like protein 
 
Region 2: 603634..613175
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Dacet_0583599177..599928 [-], 752291286519transposase-like protein 
2Dacet_0584601557..602414 [+], 858291286520hypothetical protein 
3Dacet_0585602421..602726 [-], 306291286521putative cytoplasmic protein 
4Dacet_0586602713..603417 [-], 705291286522hypothetical protein 
5Dacet_0587603410..603625 [-], 216291286523hypothetical protein 
6Dacet_0588603634..605802 [-], 2169291286524hypothetical protein 
7Dacet_0589605792..606526 [-], 735291286525type-F conjugative transfer system pilin assembly protein TrbC 
8Dacet_0590606486..606923 [-], 438291286526type IV secretory protease 
9Dacet_0591606923..610228 [-], 3306291286527proteinase inhibitor I2 Kunitz metazoa  TraN_F
10Dacet_0592610225..611874 [-], 1650291286528metal dependent phosphohydrolase 
11Dacet_0593611871..613175 [-], 1305291286529DNA transfer in the process of conjugation and F pilus assembly protein  TraD_F
12Dacet_0594613223..613504 [+], 282291286530plasmid maintenance system killer protein 
13Dacet_0595613517..613819 [+], 303291286531XRE family plasmid maintenance system antidote protein 
14Dacet_0596613828..614511 [-], 684291286532hypothetical protein 
15Dacet_0597614502..614696 [-], 195291286533hypothetical protein 
16Dacet_0598614763..615104 [-], 342291286534single-strand binding protein 
17Dacet_0599615244..617292 [+], 2049291286535Ig family protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_013943