SecReT4
T4SS ID607
StrainHelicobacter pylori P12
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_011498
Location476105..490091
NameVirB
Functionconjugation
ClassificationType IVA; Type P
experimental Experimental investigation has been performed on this T4SS.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number011000111
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_011498
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1HPP12_0449471523..471807 [+], 285210134646hypothetical protein 
2HPP12_0450471839..473017 [+], 1179210134647hypothetical protein 
3HPP12_0451 (virD2-1)473042..474955 [-], 1914210134648relaxase 
4HPP12_0452475253..475567 [+], 315210134649hypothetical protein 
5HPP12_0453475560..475841 [+], 282210134650hypothetical protein 
6HPP12_0454 (virD4-1)476105..477832 [-], 1728210134651VirD4 coupling protein  VirD4
7HPP12_0455477879..478391 [-], 513210134652hypothetical protein 
8HPP12_0456478392..478682 [-], 291210134653hypothetical protein 
9HPP12_0457478679..479134 [-], 456210134654hypothetical protein 
10HPP12_0458 (virB11-1)479131..480072 [-], 942210134655VirB11 type IV secretion ATPase  VirB11
11HPP12_0459480072..480371 [-], 300210134656hypothetical protein 
12HPP12_0460480368..480631 [-], 264210134657hypothetical protein 
13HPP12_0461480624..480917 [-], 294210134658hypothetical protein 
14HPP12_0462 (virB10-1)480987..482252 [-], 1266210134659VirB10 type IV secretion protein  VirB10
15HPP12_0463 (virB9-1)482252..483784 [-], 1533210134660VirB9 type IV secretion protein  VirB9
16HPP12_0464 (virB8-1)483784..484953 [-], 1170210134661VirB8 type IV secretion protein  VirB8
17HPP12_0465 (virB7-1)484957..485073 [-], 117210134662VirB7 type IV secretion protein  VirB7
18HPP12_0468 (virB3-1)489522..489788 [-], 267210134663VirB3 type IV secretion protein  VirB3
19HPP12_0469 (virB2-1)489789..490091 [-], 303210134664VirB2 type IV secretion protein  VirB2
20HPP12_0470490088..490372 [-], 285210134665hypothetical protein 
21HPP12_0471490433..491611 [-], 1179210134666hypothetical protein 
22HPP12_0472491618..491911 [-], 294210134667hypothetical protein 
23HPP12_0473491931..492710 [-], 780210134668hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICEHpyP12-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Fischer W; Windhager L; Rohrer S; Zeiller M; Karnholz A; Hoffmann R; Zimmer R; Haas R (2010). Strain-specific genes of Helicobacter pylori: genome evolution driven by a novel type IV secretion system and genomic island transfer. Nucleic Acids Res. 38(18):6089-101. [PudMed:20478826] experimental in_silico
 
experimental This literature contains experimental investigation
in_silico This literature contains bioinformatics investigation