SecReT4
T4SS ID609
StrainHelicobacter pylori B8
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_014256
Location510833..525420
NameVirB
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number011100011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_014256
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1HPB8_533506360..506737 [+], 378298736029hypothetical protein 
2HPB8_534506715..507380 [+], 666298736030hypothetical protein 
3HPB8_535507454..508257 [-], 804298736031hypothetical protein 
4HPB8_536508227..508697 [-], 471298736032hypothetical protein 
5HPB8_537 (topA3)508752..510812 [-], 2061298736033DNA topoisomerase I 
6HPB8_538 (virD4)510833..512962 [-], 2130298736034type IV secretion system protein VirD4  VirD4
7HPB8_539512959..513477 [-], 519298736035hypothetical protein 
8HPB8_540 (virB11-3)513474..514418 [-], 945298736036type IV secretion system protein VirB11  VirB11
9HPB8_541514423..514698 [-], 276298736037hypothetical protein 
10HPB8_542514715..515677 [-], 963298736038hypothetical protein 
11HPB8_543515690..517930 [-], 2241298736039hypothetical protein 
12HPB8_544 (virB10-1)517914..519122 [-], 1209298736040type IV secretion system protein VirB10  VirB10
13HPB8_545 (virB9-1)519119..520774 [-], 1656298736041type IV secretion system protein VirB9  VirB9
14HPB8_546 (virB8-1)520771..521907 [-], 1137298736042putative VirB8 protein  VirB8
15HPB8_547521928..522044 [+], 117298736043hypothetical protein 
16HPB8_548 (virB4-1)522037..524613 [-], 2577298736044type IV secretion system protein VirB4  VirB4
17HPB8_549524613..524849 [-], 237298736045hypothetical protein 
18HPB8_550524861..525124 [-], 264298736046hypothetical protein  VirB3
19HPB8_551525136..525420 [-], 285298736047hypothetical protein  VirB2
20HPB8_552525398..525775 [-], 378298736048hypothetical protein 
21HPB8_553525768..525998 [-], 231298736049hypothetical protein 
22HPB8_554526001..526789 [-], 789298736050hypothetical protein 
23HPB8_555526917..527504 [+], 588298736051hypothetical protein 
24HPB8_556 (xerD)527584..528657 [-], 1074298736052XerCD family integrase/recombinase 
25HPB8_557528691..528789 [-], 99298736053hypothetical protein 
26HPB8_558529230..529919 [+], 690298736054hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Farnbacher M; Jahns T; Willrodt D; Daniel R; Haas R; Goesmann A; Kurtz S; Rieder G (2010). Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8. BMC Genomics. 11:335. [PudMed:20507619] in_silico
 
in_silico This literature contains bioinformatics investigation